RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 UBALD1Q8TB05 177 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 LYRM2Q9NU23 88 aaPredicted RBP12.92□□□□□ -0.34
CSDC2-201ENST00000306149 TECTAO75443 2155 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 PRR14LQ5THK1 2151 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 IGKV3D-15A0A087WSY6 115 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A10PA6NDY2 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 BTBD17A6NE02 478 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A18PA6NE21 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A16PA6NEW6 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A20PA6NIJ5 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 ARGFXA6NJG6 315 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A8PA6NJQ4 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A7PA6NKC0 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A22PA8MWA6 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A12PA8MX19 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A5PA8MXJ8 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A23PA8MXZ1 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 C9orf172C9J069 976 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 H3BP45 60 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FABP1P07148 127 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 OR8U8P0C7N1 319 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A15PP0C7V4 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A13PP0C7W8 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A14PP0C7W9 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM90A24PP0C7X0 464 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 VAMP2P63027 116 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 SRSF7Q16629 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSDC2-201ENST00000306149 SOHLH1Q5JUK2 328 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 SPATA46Q5T0L3 261 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 ABHD17BQ5VST6 288 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 NUFIP2Q7Z417 695 aaKnown RBP12.92□□□□□ -0.34
CSDC2-201ENST00000306149 Q8NFD4 153 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 FAM173AQ9BQD7 235 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 C12orf49Q9H741 205 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 MRPS18CQ9Y3D5 142 aaKnown RBP12.92□□□□□ -0.34
CSDC2-201ENST00000306149 DUXBA0A1W2PPF3 345 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 DYNLT3P51808 116 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 RPS23P62266 143 aaKnown RBP12.92□□□□□ -0.34
CSDC2-201ENST00000306149 OR1C1Q15619 314 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 HIKESHIQ53FT3 197 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 ZNF600Q6ZNG1 722 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 C1orf210Q8IVY1 113 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 OR51H1Q8NH63 302 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 IL1F10Q8WWZ1 152 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 APOBEC3DQ96AK3 386 aaPredicted RBP12.92□□□□□ -0.34
CSDC2-201ENST00000306149 TTTY12Q9BZ98 90 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 SLC25A31Q9H0C2 315 aa12.92□□□□□ -0.34
CSDC2-201ENST00000306149 PUS1Q9Y606 427 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSDC2-201ENST00000306149 A0A1W2PNU3 283 aaPredicted RBP12.91□□□□□ -0.34
CSDC2-201ENST00000306149 CD300LBA8K4G0 201 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 CHST1O43916 411 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 SYNGR4O95473 234 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 SPSB3Q6PJ21 355 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 PRR18Q8N4B5 295 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 HIST1H2AAQ96QV6 131 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 UNKLQ9H9P5 680 aaKnown RBP12.91□□□□□ -0.34
CSDC2-201ENST00000306149 GTF3C1Q12789 2109 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 A0A0G2JRQ6 117 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 CLEC18AA5D8T8 446 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 RBFOX3A6NFN3 312 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 AP4M1O00189 453 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 RHBDL1O75783 438 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 ZNF154Q13106 437 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 CLEC18CQ8NCF0 446 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 APH1AQ96BI3 265 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 GSN-AS1Q9NRJ2 163 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 KIAA1456Q9P272 454 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 PRSS50Q9UI38 385 aa12.91□□□□□ -0.34
CSDC2-201ENST00000306149 FBP1P09467 338 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 ACP1P24666 158 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 HAGHQ16775 308 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 NMSQ5H8A3 153 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 OR2T2Q6IF00 324 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 ADAM5Q6NVV9 412 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 TMEM251Q8N6I4 163 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 PLPPR1Q8TBJ4 325 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 POM121L2Q96KW2 1035 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 ATP23Q9Y6H3 246 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
CSDC2-201ENST00000306149 TRAV20A0A0B4J274 112 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 ATXN7O15265 892 aaPredicted RBP12.9□□□□□ -0.34
CSDC2-201ENST00000306149 PGLYRP1O75594 196 aaPredicted RBP12.9□□□□□ -0.34
CSDC2-201ENST00000306149 OR2C1O95371 312 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 MMP9P14780 707 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 PLGLB1Q02325 96 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 BAXQ07812 192 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 SP5Q6BEB4 398 aaPredicted RBP12.9□□□□□ -0.34
CSDC2-201ENST00000306149 PCSK4Q6UW60 755 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 HEPN1Q6WQI6 88 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 MYPOPQ86VE0 399 aaPredicted RBP12.9□□□□□ -0.34
CSDC2-201ENST00000306149 TCTEX1D2Q8WW35 142 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 LINC00470Q9BZP3 86 aa12.9□□□□□ -0.34
CSDC2-201ENST00000306149 ERRFI1Q9UJM3 462 aaPredicted RBP12.9□□□□□ -0.34
CSDC2-201ENST00000306149 HSPA12AO43301 675 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 TUSC2O75896 110 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 IFNA17P01571 189 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 CA6P23280 308 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 WNT5AP41221 380 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms