RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 POM121Q96HA1 1249 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 ACY3Q96HD9 319 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 GRAMD2BQ96HH9 432 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 HARBI1Q96MB7 349 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 LEUTXA8MZ59 168 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 RRASP10301 218 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 THBS3P49746 956 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 SP6Q3SY56 376 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 MFSD4AQ8N468 514 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 GVQW1Q8N7I0 195 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 BORCS7Q96B45 105 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 G6PC2Q9NQR9 355 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 RAB29O14966 203 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 OR2F2O95006 317 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 SCAF4O95104 1147 aaKnown RBP7.92□□□□□ -1.14
PTPRE-202ENST00000306042 OR4E1P0C645 316 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 ACKR3P25106 362 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 B3GALT5-AS1P59052 145 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 DEFA5Q01523 94 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 MARVELD3Q96A59 401 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 ABHD14AQ9BUJ0 271 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 MAGT1Q9H0U3 335 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.92□□□□□ -1.14
PTPRE-202ENST00000306042 CRIM1Q9NZV1 1036 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 ZGRF1Q86YA3 2104 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 SIX6O95475 246 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 RBP4P02753 201 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 OPN1MWP04001 364 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 OPN1MW2P0DN77 364 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 OPN1MW3P0DN78 364 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 SAXO1Q8IYX7 474 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 DYRK2Q92630 601 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 PSENENQ9NZ42 101 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 CLDN16Q9Y5I7 305 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 USF3Q68DE3 2245 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 CLEC18AA5D8T8 446 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 ZNF154Q13106 437 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 FAM74A1Q5RGS3 127 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 CST9LP1Q5W188 147 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 LYSMD2Q8IV50 215 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 ZCCHC24Q8N2G6 241 aaKnown RBP7.92□□□□□ -1.14
PTPRE-202ENST00000306042 CLEC18CQ8NCF0 446 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 SLC39A9Q9NUM3 307 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 SIRT4Q9Y6E7 314 aaPredicted RBP7.92□□□□□ -1.14
PTPRE-202ENST00000306042 PLXNA2O75051 1894 aa7.92□□□□□ -1.14
PTPRE-202ENST00000306042 hCG_38984A0A1B0GV85 526 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 TMEM11P17152 192 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 OPRK1P41145 380 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FOXG1P55316 489 aaPredicted RBP7.91□□□□□ -1.14
PTPRE-202ENST00000306042 ASAH1Q13510 395 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 IRF3Q14653 427 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 ACSM6Q6P461 480 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 HSD17B11Q8NBQ5 300 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 DEDD2Q8WXF8 326 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 HIF1ANQ9NWT6 349 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 CREBBPQ92793 2442 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 A0A0B4J2A0 478 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 IQCF6A8MYZ5 107 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 LMX1BO60663 402 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 LY86O95711 162 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 HBZP02008 142 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 PF4P02776 101 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 EFNA4P52798 201 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 ECSCRQ19T08 205 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 ELP2Q6IA86 826 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 LYG2Q86SG7 212 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 C20orf24Q9BUV8 137 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 CALYQ9NYX4 217 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 SHPKQ9UHJ6 478 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 OR2W1Q9Y3N9 320 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 ALPK3Q96L96 1907 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 A0A0D9SG52 128 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 C3orf85A0A1B0GTC6 90 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A10PA6NDY2 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A18PA6NE21 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A16PA6NEW6 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A20PA6NIJ5 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A8PA6NJQ4 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A7PA6NKC0 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A22PA8MWA6 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A12PA8MX19 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A5PA8MXJ8 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A23PA8MXZ1 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A15PP0C7V4 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A13PP0C7W8 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A14PP0C7W9 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 FAM90A24PP0C7X0 464 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 BLOC1S1P78537 153 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 IL24Q13007 206 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 ETFRF1Q6IPR1 90 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 DRAXINQ8NBI3 349 aaPredicted RBP7.91□□□□□ -1.14
PTPRE-202ENST00000306042 DAZAP1Q96EP5 407 aaKnown RBP7.91□□□□□ -1.14
PTPRE-202ENST00000306042 HSD17B10Q99714 261 aaKnown RBP7.91□□□□□ -1.14
PTPRE-202ENST00000306042 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
PTPRE-202ENST00000306042 RHOFQ9HBH0 211 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 A0A087WV48 116 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 TRBV5-5A0A0J9YX44 114 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 TOX4O94842 621 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 BPIFB3P59826 476 aa7.91□□□□□ -1.14
PTPRE-202ENST00000306042 HOXA4Q00056 320 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms