RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 A0A1B0GU03 582 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 C7orf66A4D0T2 115 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 TMEM97Q5BJF2 176 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 PTX4Q96A99 478 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 GRAMD2BQ96HH9 432 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 SAP30LQ9HAJ7 183 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 RNF7Q9UBF6 113 aa12.18□□□□□ -0.46
PRKCB-201ENST00000303531 MS4A18H0YCH9 400 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 MS4A18Q3C1V0 323 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF880Q6PDB4 577 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 SMRP1Q8NCR6 262 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 H3BQ15 152 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 PAGE4O60829 102 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 SLC35E3Q7Z769 313 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 PATE3B3GLJ2 98 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 M0R2Z0 102 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 CSN3P07498 182 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 OR10A7Q8NGE5 316 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 VSIG10L2P0DP72 767 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 CD1AP06126 327 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 LINC00596Q86U02 117 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 DUSP15Q9H1R2 295 aaPredicted RBP12.17□□□□□ -0.46
PRKCB-201ENST00000303531 MFNGO00587 321 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 RCC1P18754 421 aaPredicted RBP12.17□□□□□ -0.46
PRKCB-201ENST00000303531 AESQ08117 197 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 LPAR5Q9H1C0 372 aa12.17□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF253O75346 499 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 PGLYRP3Q96LB9 341 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
PRKCB-201ENST00000303531 RBM11P57052 281 aaKnown RBP12.16□□□□□ -0.46
PRKCB-201ENST00000303531 FUT5Q11128 374 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 WASHC3Q9Y3C0 194 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 DNPH1O43598 174 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 FAM87AP0C7U9 286 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 ZP4Q12836 540 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 PRSS53Q2L4Q9 553 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 MRGPRGQ86SM5 289 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 MDP1Q86V88 176 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 DCAF12L2Q5VW00 463 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 PACRGQ96M98 296 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-201ENST00000303531 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 SEC11BP0C7V7 166 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 CLPPQ16740 277 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-201ENST00000303531 FBXW9Q5XUX1 488 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 CHAC2Q8WUX2 184 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 OR10C1Q96KK4 312 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF488Q96MN9 340 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 ALX4Q9H161 411 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF665Q9H7R5 613 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 UPK3AO75631 287 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 FAM157CP0CG43 387 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 ATP6V0CP27449 155 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 OR1L6Q8NGR2 347 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 PRNDQ9UKY0 176 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 KCNK7Q9Y2U2 307 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 GCM2O75603 506 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-201ENST00000303531 ACP1P24666 158 aa12.16□□□□□ -0.46
PRKCB-201ENST00000303531 GSX1Q9H4S2 264 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-201ENST00000303531 FCGR3AP08637 254 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 HLA-DRB5Q30154 266 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 DCAF10Q5QP82 559 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF788Q6ZQV5 615 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 LRP11Q86VZ4 500 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 OR8B3Q8NGG8 313 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 OR8B2Q96RD0 313 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
PRKCB-201ENST00000303531 TMEM210A6NLX4 147 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 CA11O75493 328 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 CXCL2P19875 107 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 WFDC6Q9BQY6 131 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 FUT9Q9Y231 359 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 UFC1Q9Y3C8 167 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 SPTBP11277 2137 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 GNG7O60262 68 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ERGP11308 486 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 B2MP61769 119 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ANKRD55Q3KP44 614 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 LYPD8Q6UX82 237 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 SLC22A18ASQ8N1D0 253 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ZBTB34Q8NCN2 500 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF501Q96CX3 271 aaPredicted RBP12.15□□□□□ -0.46
PRKCB-201ENST00000303531 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF318Q5VUA4 2279 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 DNASE2O00115 360 aaPredicted RBP12.15□□□□□ -0.46
PRKCB-201ENST00000303531 PDE6DO43924 150 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 VWA1Q6PCB0 445 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 UBR3Q6ZT12 1888 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 TGIF2LYQ8IUE0 185 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 C5orf17Q8NAS9 161 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 ZNF519Q8TB69 540 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 SIRT7Q9NRC8 400 aa12.15□□□□□ -0.46
PRKCB-201ENST00000303531 P01737 135 aa12.15□□□□□ -0.47
PRKCB-201ENST00000303531 HLA-DQB1P01920 261 aa12.15□□□□□ -0.47
PRKCB-201ENST00000303531 CRYBA1P05813 215 aa12.15□□□□□ -0.47
PRKCB-201ENST00000303531 LGALS7P47929 136 aa12.15□□□□□ -0.47
PRKCB-201ENST00000303531 INO80CQ6PI98 192 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms