RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 DLX1P56177 255 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 CHRFAM7AQ494W8 412 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 C6orf183Q5T699 404 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 ZNF782Q6ZMW2 699 aaPredicted RBP20.06■□□□□ 0.8
HOXC9-201ENST00000303450 HDHD3Q9BSH5 251 aaPredicted RBP20.06■□□□□ 0.8
HOXC9-201ENST00000303450 DCUN1D5Q9BTE7 237 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 C12orf4Q9NQ89 552 aa20.06■□□□□ 0.8
HOXC9-201ENST00000303450 TRAV18A0A075B6X5 111 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 NAPSAO96009 420 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 EIF4EP06730 217 aaKnown RBP20.05■□□□□ 0.8
HOXC9-201ENST00000303450 CGB3P0DN86 165 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 CGB7P0DN87 165 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 RCC1P18754 421 aaPredicted RBP20.05■□□□□ 0.8
HOXC9-201ENST00000303450 SSTR5P35346 364 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 PRB3Q04118 309 aaPredicted RBP20.05■□□□□ 0.8
HOXC9-201ENST00000303450 ARFRP1Q13795 201 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 C17orf58Q2M2W7 97 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 GPR157Q5UAW9 335 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 NCR3LG1Q68D85 454 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 TRAT1Q6PIZ9 186 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 SETD6Q8TBK2 473 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 KCNIP1Q9NZI2 227 aa20.05■□□□□ 0.8
HOXC9-201ENST00000303450 FN1P02751 2386 aaKnown RBP20.05■□□□□ 0.8
HOXC9-201ENST00000303450 IGHV3OR16-10A0A075B7F0 116 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 RGS5O15539 181 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 XRCC3O43542 346 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 ORC5O43913 435 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 GSTP1P09211 210 aaKnown RBP20.04■□□□□ 0.8
HOXC9-201ENST00000303450 OMGP23515 440 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 KLF17Q5JT82 389 aaPredicted RBP20.04■□□□□ 0.8
HOXC9-201ENST00000303450 PRAMEF5Q5TYX0 476 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 HEPN1Q6WQI6 88 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 NAV3Q8IVL0 2385 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 PDZD9Q8IXQ8 264 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 RFESDQ8TAC1 157 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 TNFRSF14Q92956 283 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 ARL11Q969Q4 196 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 SLIRPQ9GZT3 109 aaKnown RBP20.04■□□□□ 0.8
HOXC9-201ENST00000303450 HEXA-AS1Q9H8Q6 139 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.04■□□□□ 0.8
HOXC9-201ENST00000303450 MBNL3Q9NUK0 354 aaKnown RBP20.04■□□□□ 0.8
HOXC9-201ENST00000303450 SESN1Q9Y6P5 492 aa20.04■□□□□ 0.8
HOXC9-201ENST00000303450 ANK3Q12955 4377 aaKnown RBP20.03■□□□□ 0.8
HOXC9-201ENST00000303450 CENPVL3A0A0U1RRI6 287 aa20.03■□□□□ 0.8
HOXC9-201ENST00000303450 FAM25AB3EWG3 89 aa20.03■□□□□ 0.8
HOXC9-201ENST00000303450 FAM25CB3EWG5 89 aa20.03■□□□□ 0.8
HOXC9-201ENST00000303450 FAM25GB3EWG6 89 aa20.03■□□□□ 0.8
HOXC9-201ENST00000303450 IGHV4-38-2P0DP08 117 aa20.03■□□□□ 0.8
HOXC9-201ENST00000303450 HOXB4P17483 251 aaPredicted RBP20.03■□□□□ 0.8
HOXC9-201ENST00000303450 ZNF260Q3ZCT1 412 aa20.03■□□□□ 0.8
HOXC9-201ENST00000303450 NUP50Q9UKX7 468 aa20.03■□□□□ 0.8
HOXC9-201ENST00000303450 TRBV6-6A0A0A6YYG2 114 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 TMEM235A6NFC5 223 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 MMP23AO75900 390 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 FSHBP01225 129 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 SRD5A1P18405 259 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 ELK1P19419 428 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 TALDO1P37837 337 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 GUCA2AQ02747 115 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 KLRD1Q13241 179 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 TMEM69Q5SWH9 247 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 HACD4Q5VWC8 232 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 FOXB2Q5VYV0 432 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 MOB1BQ7L9L4 216 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 LURAP1LQ8IV03 231 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 IZUMO1Q8IYV9 350 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 DTX3Q8N9I9 347 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 C6orf62Q9GZU0 229 aaPredicted RBP20.02■□□□□ 0.8
HOXC9-201ENST00000303450 LINC00574Q9H8X3 128 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 RAB9BQ9NP90 201 aa20.02■□□□□ 0.8
HOXC9-201ENST00000303450 ELF5Q9UKW6 265 aaPredicted RBP20.02■□□□□ 0.8
HOXC9-201ENST00000303450 C12orf77C9JDV5 145 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 NPIPB11E5RHQ5 1161 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 RNASEK-C17orf49H0YIS7 233 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 SPINT2O43291 252 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 CRLF1O75462 422 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 MNDAP41218 407 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 PNLIPRP3Q17RR3 467 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 OR52W1Q6IF63 320 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 PRR18Q8N4B5 295 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 OR13D1Q8NGV5 346 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 MCFD2Q8NI22 146 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 TAF9BQ9HBM6 251 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 IDI2-AS1Q9NZ38 188 aa20.02■□□□□ 0.79
HOXC9-201ENST00000303450 POM121CA8CG34 1229 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 C15orf65H3BRN8 121 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 CTDSP2O14595 271 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 COX7A1P24310 79 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 GNG2P59768 71 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 LTC4SQ16873 150 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 ZNF880Q6PDB4 577 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 ZNF554Q86TJ5 538 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 UBALD1Q8TB05 177 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 KIRREL1Q96J84 757 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 SUCNR1Q9BXA5 334 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 TMEM133Q9H2Q1 129 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 MGAT4AQ9UM21 535 aa20.01■□□□□ 0.79
HOXC9-201ENST00000303450 IGHV1-69DA0A0B4J2H0 117 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 IGHV1-69P01742 117 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 NFYBP25208 207 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms