RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PTBP3O95758 552 aaKnown RBP12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 THBDP07204 575 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 OR4A8P0C604 315 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 HOXA4Q00056 320 aaPredicted RBP12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 SHEQ5VZ18 495 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 ZNF546Q86UE3 836 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 CMTM1Q8IZ96 169 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 OR10Z1Q8NGY1 313 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 CA5BP1Q8WTZ4 195 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 DECR2Q9NUI1 292 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 RDH8Q9NYR8 311 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 ZDHHC8Q9ULC8 765 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 ARID1AO14497 2285 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 G3V3Q6 166 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 HLA-GP17693 338 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 COL10A1Q03692 680 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 SNTB1Q13884 538 aaKnown RBP12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 OR11L1Q8NGX0 322 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 UBALD1Q8TB05 177 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 ARL6Q9H0F7 186 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 WIPI2Q9Y4P8 454 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 CACNA1DQ01668 2161 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 SP6Q3SY56 376 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 MFFQ9GZY8 342 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 PRORYQ9H606 182 aa12.23□□□□□ -0.45
SHCBP1-201ENST00000303383 HSD17B6O14756 317 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 PHF1O43189 567 aaPredicted RBP12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 PSPNO60542 156 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 AESQ08117 197 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 CHD3Q12873 2000 aaKnown RBP12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 HMSDA8MTL9 139 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 IFNL4K9M1U5 179 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 IL2RGP31785 369 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 PRDX2P32119 198 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 EDDM3AQ14507 147 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 FAM185AQ8N0U4 392 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 FAM122AQ96E09 287 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 TAF9BQ9HBM6 251 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 IL19Q9UHD0 177 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 KIF25Q9UIL4 384 aa12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 UBE2J1Q9Y385 318 aaPredicted RBP12.22□□□□□ -0.45
SHCBP1-201ENST00000303383 POM121CA8CG34 1229 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 GPR31O00270 319 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 CD8AP01732 235 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 TFF1P04155 84 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 KCNJ3P48549 501 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 OPCMLQ14982 345 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 HERPUD1Q15011 391 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 NINJ1Q92982 152 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 SUCNR1Q9BXA5 334 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 ERRFI1Q9UJM3 462 aaPredicted RBP12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 IGHV3OR15-7A0A075B7D8 119 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 NKX2-6A6NCS4 301 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 SRRM5B3KS81 715 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 MEX3BQ6ZN04 569 aaKnown RBP12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 INO80EQ8NBZ0 244 aaPredicted RBP12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 PLPPR2Q96GM1 343 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
SHCBP1-201ENST00000303383 A0A1B0GWJ7 208 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 DBX1A6NMT0 343 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 CD3EP07766 207 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 RPS2P15880 293 aaKnown RBP12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 TNFRSF1AP19438 455 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 NUP62P37198 522 aaPredicted RBP12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 C11orf87Q6NUJ2 197 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 ZNF767PQ75MW2 155 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 PRR7Q8TB68 274 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 RNASE6Q93091 150 aaKnown RBP12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 DYNLRB1Q9NP97 96 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 KCNS2Q9ULS6 477 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 OR2W1Q9Y3N9 320 aa12.21□□□□□ -0.46
SHCBP1-201ENST00000303383 S100A6P06703 90 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 LMO1P25800 156 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 PSMB6P28072 239 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 S100A11P31949 105 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 S100A10P60903 97 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 ZNF880Q6PDB4 577 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 LGI3Q8N145 548 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 NMES1Q9C002 83 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 PKDREJQ9NTG1 2253 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 PSG2P11465 335 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 EGR1P18146 543 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 CXCL2P19875 107 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 CCL8P80075 99 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 ADIPOQQ15848 244 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 IAH1Q2TAA2 248 aaPredicted RBP12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 GAPTQ8N292 157 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 GALMQ96C23 342 aa12.2□□□□□ -0.46
SHCBP1-201ENST00000303383 C2orf50Q96LR7 162 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms