RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NECAP2Q9NVZ3 263 aa18.74■□□□□ 0.59
TPM4-201ENST00000300933 WRBO00258 174 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 RHBDL1O75783 438 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 TCF15Q12870 199 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 CLINT1Q14677 625 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 KIAA2026Q5HYC2 2103 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 NEK7Q8TDX7 302 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 CADP27708 2225 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 ICE1Q9Y2F5 2266 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 IGHV1-2P23083 117 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 ALKBH6Q3KRA9 238 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 EXTL1Q92935 676 aa18.73■□□□□ 0.59
TPM4-201ENST00000300933 HS3ST1O14792 307 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 CA11O75493 328 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 AGFG2O95081 481 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 IFNA2P01563 188 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 PRH1P02810 166 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 CAMLGP49069 296 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 HOXA4Q00056 320 aaPredicted RBP18.72■□□□□ 0.59
TPM4-201ENST00000300933 PPA1Q15181 289 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 RTL6Q6ICC9 239 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 HIST1H2AAQ96QV6 131 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 TUBA4BQ9H853 241 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 FAM212BQ9NTI7 297 aaPredicted RBP18.72■□□□□ 0.59
TPM4-201ENST00000300933 PUS1Q9Y606 427 aaKnown RBP eCLIP18.72■□□□□ 0.59
TPM4-201ENST00000300933 RPS10P46783 165 aaKnown RBP18.72■□□□□ 0.59
TPM4-201ENST00000300933 VWA1Q6PCB0 445 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 OR5L1Q8NGL2 311 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 IL36GQ9NZH8 169 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 LUZP4Q9P127 313 aa18.72■□□□□ 0.59
TPM4-201ENST00000300933 COX5BP10606 129 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 LYPD6BQ8NI32 183 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 PRRX2Q99811 253 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 OR2J1Q9GZK6 312 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 ACACAQ13085 2346 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 ZNF728P0DKX0 622 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 FOXF2Q12947 444 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 KIAA0141Q14154 515 aaPredicted RBP18.71■□□□□ 0.59
TPM4-201ENST00000300933 PYY3Q5JQD4 70 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 ALKBH2Q6NS38 261 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 RDH5Q92781 318 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 SCRT1Q9BWW7 348 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 KCNJ16Q9NPI9 418 aa18.71■□□□□ 0.59
TPM4-201ENST00000300933 ZNF729A6NN14 1252 aaPredicted RBP18.7■□□□□ 0.58
TPM4-201ENST00000300933 SS18L1O75177 396 aaPredicted RBP18.7■□□□□ 0.58
TPM4-201ENST00000300933 DTYMKP23919 212 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 PMELP40967 661 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 SGPP2Q8IWX5 399 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 MRPL24Q96A35 216 aaKnown RBP18.7■□□□□ 0.58
TPM4-201ENST00000300933 SH3BGRL3Q9H299 93 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 MMP24Q9Y5R2 645 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 DMRT1Q9Y5R6 373 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 CEP295Q9C0D2 2601 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 PTPRBP23467 1997 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 ANKRD30BLA7E2S9 258 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 TRAPPC2LH3BP13 241 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 RRP8O43159 456 aaKnown RBP18.7■□□□□ 0.58
TPM4-201ENST00000300933 DEDDO75618 318 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 SCTP09683 121 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 CD82P27701 267 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 RAB5CP51148 216 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 OR1J1Q8NGS3 322 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 ZNF286AQ9HBT8 521 aa18.7■□□□□ 0.58
TPM4-201ENST00000300933 HEATR1Q9H583 2144 aaKnown RBP18.69■□□□□ 0.58
TPM4-201ENST00000300933 TRAV39A0A0B4J263 110 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 OR2C1O95371 312 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 OR5AC1P0C628 307 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 AADACP22760 399 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 GPX4P36969 197 aaPredicted RBP18.69■□□□□ 0.58
TPM4-201ENST00000300933 NDUFA6P56556 154 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 ABCA11PQ4W5N1 156 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 NSUN5P2Q63ZY6 315 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 C9orf106Q8NAJ2 232 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 OR5P3Q8WZ94 311 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 GMPPAQ96IJ6 420 aaPredicted RBP18.69■□□□□ 0.58
TPM4-201ENST00000300933 RHOVQ96L33 236 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 TECTBQ96PL2 329 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 CACNA1DQ01668 2161 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 IFNA17P01571 189 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 RTN4IP1Q8WWV3 396 aaPredicted RBP18.69■□□□□ 0.58
TPM4-201ENST00000300933 C1orf123Q9NWV4 160 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 APC2O95996 2303 aa18.69■□□□□ 0.58
TPM4-201ENST00000300933 IFITM10A6NMD0 228 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 GAPDHP04406 335 aaKnown RBP18.68■□□□□ 0.58
TPM4-201ENST00000300933 CEBPGP53567 150 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 DEFA6Q01524 100 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 ZNF383Q8NA42 475 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 TAAR6Q96RI8 345 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 CTSDP07339 412 aaPredicted RBP18.68■□□□□ 0.58
TPM4-201ENST00000300933 UBE2NP61088 152 aaKnown RBP18.68■□□□□ 0.58
TPM4-201ENST00000300933 MKXQ8IYA7 352 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 HSD17B11Q8NBQ5 300 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 CLCF1Q9UBD9 225 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 BSNQ9UPA5 3926 aa18.68■□□□□ 0.58
TPM4-201ENST00000300933 CRYM-AS1A6NIL9 109 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 TM4SF5O14894 197 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 DIRAS3O95661 229 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 FGF12P61328 243 aa18.67■□□□□ 0.58
TPM4-201ENST00000300933 RPS23P62266 143 aaKnown RBP18.67■□□□□ 0.58
TPM4-201ENST00000300933 GGNBP1Q5YKI7 109 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms