RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MALSU1Q96EH3 234 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 PRSS50Q9UI38 385 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 CFAP47Q6ZTR5 3102 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 MED12LQ86YW9 2145 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 SLC22A20A6NK97 555 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 CD300LBA8K4G0 201 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 NAPSAO96009 420 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 IL13RA2Q14627 380 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 GPR157Q5UAW9 335 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 NBEAQ8NFP9 2946 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 APOBEC3DQ96AK3 386 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-204ENST00000300862 GINS3Q9BRX5 216 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 ABHD14AQ9BUJ0 271 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 LINC00470Q9BZP3 86 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 C19orf12Q9NSK7 152 aa11.03□□□□□ -0.64
HIF3A-204ENST00000300862 KIAA2026Q5HYC2 2103 aa11.02□□□□□ -0.64
HIF3A-204ENST00000300862 PRR14LQ5THK1 2151 aa11.02□□□□□ -0.64
HIF3A-204ENST00000300862 IGSF23A1L1A6 192 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 ARGFXA6NJG6 315 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 UMAD1C9J7I0 102 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 PPP1CCP36873 323 aaKnown RBP11.02□□□□□ -0.65
HIF3A-204ENST00000300862 NKX2-1P43699 371 aaPredicted RBP11.02□□□□□ -0.65
HIF3A-204ENST00000300862 MKXQ8IYA7 352 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
HIF3A-204ENST00000300862 OR2C3Q8N628 320 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 FAM213BQ8TBF2 198 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 BOD1Q96IK1 185 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 POM121L2Q96KW2 1035 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 FAM86C1Q9NVL1 165 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 FBXO7Q9Y3I1 522 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 LIPGQ9Y5X9 500 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 DIDO1Q9BTC0 2240 aaKnown RBP11.02□□□□□ -0.65
HIF3A-204ENST00000300862 CST7O76096 145 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 NRN1LQ496H8 165 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 OR2B11Q5JQS5 317 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 ATP1A1-AS1Q5TC04 95 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 DEFB123Q8N688 67 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 Q8NFD4 153 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 UBALD1Q8TB05 177 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 HIST1H2AAQ96QV6 131 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 GGACTQ9BVM4 153 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 TMPRSS5Q9H3S3 457 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 LUZP4Q9P127 313 aa11.02□□□□□ -0.65
HIF3A-204ENST00000300862 IFITM10A6NMD0 228 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 GPR37O15354 613 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 RHBDL1O75783 438 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 WNT5AP41221 380 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 IZUMO4Q1ZYL8 232 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 OR2T2Q6IF00 324 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 SUMF2Q8NBJ7 301 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 TMEM171Q8WVE6 324 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 ZPBPQ9BS86 351 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 DEFB127Q9H1M4 99 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 A0A1W2PR80 420 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 CDRT15L2A8MXV6 281 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 TMEM50AO95807 157 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 CA6P23280 308 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 LMO1P25800 156 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 RHEBQ15382 184 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 C9orf152Q5JTZ5 239 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 CDPF1Q6NVV7 123 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 MCEMP1Q8IX19 187 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 IL1F10Q8WWZ1 152 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 DDA1Q9BW61 102 aa11.01□□□□□ -0.65
HIF3A-204ENST00000300862 ZNF724A8MTY0 619 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 RPS23P62266 143 aaKnown RBP11□□□□□ -0.65
HIF3A-204ENST00000300862 PLP2Q04941 152 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 PRR18Q8N4B5 295 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 COMMD1Q8N668 190 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 OR1J1Q8NGS3 322 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 OR51H1Q8NH63 302 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 GLRX2Q9NS18 164 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 DMRT1Q9Y5R6 373 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 ZNF729A6NN14 1252 aaPredicted RBP11□□□□□ -0.65
HIF3A-204ENST00000300862 PROB1E7EW31 1015 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 YIF1AO95070 293 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 CDS2O95674 445 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 OR13C7P0DN81 318 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 SELLP14151 372 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 EPHA1P21709 976 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 MEOX1P50221 254 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 CCL20P78556 96 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 ZFP62Q8NB50 900 aaPredicted RBP11□□□□□ -0.65
HIF3A-204ENST00000300862 CD300LFQ8TDQ1 290 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 OR5P3Q8WZ94 311 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 TMEM56Q96MV1 263 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 RARRES2Q99969 163 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 C11orf1Q9H5F2 150 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 GTF3C1Q12789 2109 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 CACNA1DQ01668 2161 aa11□□□□□ -0.65
HIF3A-204ENST00000300862 TRAV24A0A0B4J272 114 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 WRBO00258 174 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 ATP6V0CP27449 155 aa10.99□□□□□ -0.65
HIF3A-204ENST00000300862 MAS1LP35410 378 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms