RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 A0A1W2PNV4 684 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 M0R135 149 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 UCP3P55916 312 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 OR4F5Q8NH21 305 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 ZNF799Q96GE5 643 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 OR4F4Q96R69 305 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 CCL28Q9NRJ3 127 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 ALKBH4Q9NXW9 302 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 FOXJ2Q9P0K8 574 aa9.47□□□□□ -0.89
SNX20-201ENST00000300590 GRIFINA4D1Z8 144 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 LINC00614P0C842 121 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 GRB2P62993 217 aaKnown RBP9.46□□□□□ -0.89
SNX20-201ENST00000300590 MRPS11P82912 194 aaKnown RBP9.46□□□□□ -0.89
SNX20-201ENST00000300590 C17orf67Q0P5P2 114 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 EXT1Q16394 746 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 OR1N1Q8NGS0 311 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 OR2T10Q8NGZ9 312 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 ANGPTL4Q9BY76 406 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 OR51I2Q9H344 312 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 NAT8Q9UHE5 227 aa9.46□□□□□ -0.89
SNX20-201ENST00000300590 ZNF320A2RRD8 509 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 BLACEA4D250 179 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 B4E171 279 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 TRAF3IP2O43734 574 aaPredicted RBP9.46□□□□□ -0.9
SNX20-201ENST00000300590 LCATP04180 440 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 DEFA4P12838 97 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 ZNF16P17020 682 aaPredicted RBP9.46□□□□□ -0.9
SNX20-201ENST00000300590 RPL23P62829 140 aaKnown RBP9.46□□□□□ -0.9
SNX20-201ENST00000300590 MALLQ13021 153 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 RAB35Q15286 201 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 DCAF10Q5QP82 559 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 ABLIM2Q6H8Q1 611 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 PP6455Q8WZ26 134 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 ZNF845Q96IR2 970 aaPredicted RBP9.46□□□□□ -0.9
SNX20-201ENST00000300590 VPS25Q9BRG1 176 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 CTDSP1Q9GZU7 261 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 SLC25A22Q9H936 323 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 PATZ1Q9HBE1 687 aaKnown RBP9.46□□□□□ -0.9
SNX20-201ENST00000300590 CPAMD8Q8IZJ3 1885 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 IGKV1-12A0A0C4DH73 117 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 A0A0G2JRQ6 117 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 C20orf202A1L168 122 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 IGKV1D-12P01611 117 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 SCTP09683 121 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 CCL1P22362 96 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 C1orf194Q5T5A4 169 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 FAM78BQ5VT40 261 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 FAM69BQ5VUD6 431 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 OR8G2PQ6IF36 304 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 SLC25A47Q6Q0C1 308 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 TCFL5Q9UL49 500 aa9.46□□□□□ -0.9
SNX20-201ENST00000300590 IGKV1D-13A0A0B4J2D9 117 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 PDGFBP01127 241 aaPredicted RBP9.45□□□□□ -0.9
SNX20-201ENST00000300590 IGKV1-13P0DP09 117 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 CCL5P13501 91 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 MSX1P28360 303 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 TNFSF10P50591 281 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 CNN1P51911 297 aaKnown RBP9.45□□□□□ -0.9
SNX20-201ENST00000300590 PAX9P55771 341 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 PMP22Q01453 160 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 Q6ZPA2 131 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 TMEM170AQ8WVE7 144 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 PIGCQ92535 297 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 SIGLEC12Q96PQ1 595 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 ANKUB1A6NFN9 424 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 ARL16Q0P5N6 197 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 IL24Q13007 206 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 AARDQ4LEZ3 155 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 TMEM41BQ5BJD5 291 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 SPANXN5Q5MJ07 72 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 VHLLQ6RSH7 139 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 OSR2Q8N2R0 312 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 PLPPR1Q8TBJ4 325 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
SNX20-201ENST00000300590 ST8SIA1Q92185 356 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 ZNF837Q96EG3 531 aaPredicted RBP9.45□□□□□ -0.9
SNX20-201ENST00000300590 TWSG1Q9GZX9 223 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 CACNA1DQ01668 2161 aa9.45□□□□□ -0.9
SNX20-201ENST00000300590 C3orf80F5H4A9 247 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 DTYMKP23919 212 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 MDH2P40926 338 aaKnown RBP9.44□□□□□ -0.9
SNX20-201ENST00000300590 ID3Q02535 119 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 ENDOGQ14249 297 aaKnown RBP9.44□□□□□ -0.9
SNX20-201ENST00000300590 PHYHD1Q5SRE7 291 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 TCF23Q7RTU1 214 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 GJC3Q8NFK1 279 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 OR2V1Q8NHB1 315 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 ZNF296Q8WUU4 475 aaPredicted RBP9.44□□□□□ -0.9
SNX20-201ENST00000300590 PARLQ9H300 379 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 LPAR2Q9HBW0 351 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 TMEM131Q92545 1883 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 M0QZK8 103 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 TP53I11O14683 189 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 GGCTO75223 188 aaKnown RBP9.44□□□□□ -0.9
SNX20-201ENST00000300590 VDAC1P21796 283 aa9.44□□□□□ -0.9
SNX20-201ENST00000300590 FBLP22087 321 aaKnown RBP9.44□□□□□ -0.9
SNX20-201ENST00000300590 GCH1P30793 250 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms