RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 Q9N2K0 584 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RREB1Q92766 1687 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MELTFP08582 738 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR2T10Q8NGZ9 312 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 GPA33Q99795 319 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CCL21O00585 134 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ATXN7O15265 892 aaPredicted RBP11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PHYHIPLQ96FC7 376 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TRAF4Q9BUZ4 470 aaPredicted RBP11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RTN4RQ9BZR6 473 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR51B2Q9Y5P1 312 aa11.87□□□□□ -0.51
CHRFAM7A-201ENST00000299847 GLI3P10071 1580 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C21orf58P58505 322 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CCL8P80075 99 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C16orf82Q7Z2V1 217 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PAPPA2Q9BXP8 1791 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MAP1LC3CQ9BXW4 147 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PCED1AQ9H1Q7 454 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C9orf172C9J069 976 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF207O43670 478 aaKnown RBP11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HOXC4P09017 264 aaPredicted RBP11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR8I2Q8N0Y5 310 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR1L1Q8NH94 360 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 APOBEC4Q8WW27 367 aaKnown RBP11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TTTY12Q9BZ98 90 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TMEM38BQ9NVV0 291 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SCN3AQ9NY46 2000 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 COL13A1Q5TAT6 717 aaPredicted RBP11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 WDR74Q6RFH5 385 aaPredicted RBP11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HSD17B13Q7Z5P4 300 aaPredicted RBP11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 GPHA2Q96T91 129 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SCN1AP35498 2009 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ADAMTSL3P82987 1691 aa11.86□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TRBV23-1A0A0A0MS06 115 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PLAUP00749 431 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MMP9P14780 707 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 DOLPP1Q86YN1 238 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SLC25A10Q9UBX3 287 aaPredicted RBP11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ATP6V1FQ16864 119 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PACRGQ96M98 296 aaPredicted RBP11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TMEM167BQ9NRX6 74 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RNF24Q9Y225 148 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ADRA2AP08913 450 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 GALP22466 123 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MMDQ15546 238 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TWIST1Q15672 202 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C21orf62-AS1Q17RA5 79 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CCL13Q99616 98 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF426Q9BUY5 554 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 BCORQ6W2J9 1755 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 H7C2G1 150 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 APCSP02743 223 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CRHP06850 196 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 LIFP15018 202 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 LGALSLQ3ZCW2 172 aaPredicted RBP11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CDK2AP1O14519 115 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TMEM127O75204 238 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 UPK3AO75631 287 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 VSIG8P0DPA2 414 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF250P15622 560 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OVCH2Q7RTZ1 564 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RNF122Q9H9V4 155 aa11.85□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SEMA7AO75326 666 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CLDN14O95500 239 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 GCSHP23434 173 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 BRS3P32247 399 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 CD81P60033 236 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MESP2Q0VG99 397 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SIGIRRQ6IA17 410 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 EIF4E3Q8N5X7 224 aaKnown RBP11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ZNF721Q8TF20 911 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 HELTA6NFD8 242 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 LMX1BO60663 402 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 VN1R17PQ8TDU5 208 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ABHD14BQ96IU4 210 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 PAM16Q9Y3D7 125 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 KCNMB2Q9Y691 235 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IGSF11Q5DX21 431 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SSX8Q7RTT4 187 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 SLC25A42Q86VD7 318 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 Q8WTZ3 238 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 NPAS1Q99742 590 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ASCC3Q8N3C0 2202 aaKnown RBP11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 RUNX1Q01196 453 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ELOBQ15370 118 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C9orf62Q8N4C0 152 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 OR5A2Q8NGI9 324 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 H3BQ15 152 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 AP4M1O00189 453 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 C1QAP02745 245 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms