RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
SPIDR-201ENST00000297423 UBE2L5PA0A1B0GUS4 154 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 MAP1LC3B2A6NCE7 125 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 HSPB1P04792 205 aaKnown RBP12.88□□□□□ -0.35
SPIDR-201ENST00000297423 EFNA3P52797 238 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 ARSJQ5FYB0 599 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-201ENST00000297423 SLC35E3Q7Z769 313 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 C1orf210Q8IVY1 113 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 MAP1LC3BQ9GZQ8 125 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 LIME1Q9H400 295 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 FSCN3Q9NQT6 498 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 TRAPPC1Q9Y5R8 145 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 FGF5P12034 268 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 LYL1P12980 280 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 UCP3P55916 312 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 PRSS8Q16651 343 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 PMS2CLQ68D20 193 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 TEX38Q6PEX7 206 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 RBKSQ9H477 322 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 M0R135 149 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 HLA-BQ31612 363 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 ZNF799Q96GE5 643 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 GLRX2Q9NS18 164 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 TUBD1Q9UJT1 453 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 TIMM8BQ9Y5J9 83 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-201ENST00000297423 TRAV39A0A0B4J263 110 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 BLACEA4D250 179 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 CRYAAP02489 173 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 SFTPCP11686 197 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 CEACAM1P13688 526 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-201ENST00000297423 C9orf40Q8IXQ3 194 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 TMEM208Q9BTX3 173 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 RNF24Q9Y225 148 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 V9GYS6 101 aa12.88□□□□□ -0.35
SPIDR-201ENST00000297423 FRG2CA6NGY1 282 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 NPIPA2E9PIF3 369 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 NPIPA3F8WFD2 350 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 MPPED1O15442 326 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 CLDN1O95832 211 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 IGHV3-9P01782 118 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 LBHQ53QV2 105 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-201ENST00000297423 ERASQ7Z444 233 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 WDR5BQ86VZ2 330 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 C11orf42Q8N5U0 333 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 CLDND2Q8NHS1 167 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 FGF21Q9NSA1 209 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 ALG1L2C9J202 215 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 BCL2P10415 239 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 ECI1P42126 302 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 GAPTQ8N292 157 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 ATP5SQ99766 215 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 SLC7A10Q9NS82 523 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 ZNF133P52736 654 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-201ENST00000297423 ZNF100Q8IYN0 542 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 OR2T10Q8NGZ9 312 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 SEMA5BQ9P283 1151 aa12.87□□□□□ -0.35
SPIDR-201ENST00000297423 THADAQ6YHU6 1953 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 LRRC3CA6NJW4 275 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 TRIM61Q5EBN2 209 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 RAET1LQ5VY80 246 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 SSX7Q7RTT5 188 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 MCEMP1Q8IX19 187 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 LIPHQ8WWY8 451 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 KCNK17Q96T54 332 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 CCL28Q9NRJ3 127 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 DEFA4P12838 97 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 PSMB3P49720 205 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 IL15RAQ13261 267 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 THEM4Q5T1C6 240 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 SLC25A26Q70HW3 274 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 PPP1R3CQ9UQK1 317 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 ANKUB1A6NFN9 424 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
SPIDR-201ENST00000297423 NEU1Q99519 415 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 Q9N2K0 584 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
SPIDR-201ENST00000297423 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 PCNX1Q96RV3 2341 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 HS3ST1O14792 307 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 PPYP01298 95 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 PTTG1IPP53801 180 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 RABEPKQ7Z6M1 372 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 C17orf82Q86X59 251 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-201ENST00000297423 NAGKQ9UJ70 344 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 SUCLG1P53597 346 aaKnown RBP12.85□□□□□ -0.35
SPIDR-201ENST00000297423 KCNIP4Q6PIL6 250 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 RDH5Q92781 318 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 ZDHHC11Q9H8X9 412 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 CACNA1BQ00975 2339 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 PROB1E7EW31 1015 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 E9PLN8 166 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 GNB2P62879 340 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 ZNF506Q5JVG8 444 aa12.85□□□□□ -0.35
SPIDR-201ENST00000297423 GUSBP11Q6P575 273 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms