RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CD200P41217 278 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 FUT6P51993 359 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 RPS27AP62979 156 aaKnown RBP8.73□□□□□ -1.01
RFC4-201ENST00000296273 UNC119Q13432 240 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 GK2Q14410 553 aaPredicted RBP8.73□□□□□ -1.01
RFC4-201ENST00000296273 OR8B8Q15620 311 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 MPPED2Q15777 294 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 RNASE10Q5GAN6 216 aaKnown RBP8.73□□□□□ -1.01
RFC4-201ENST00000296273 FAM201AQ5SY85 155 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 LYPD2Q6UXB3 125 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 ASCL4Q6XD76 172 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 ZSCAN4Q8NAM6 433 aaPredicted RBP8.73□□□□□ -1.01
RFC4-201ENST00000296273 CHST4Q8NCG5 386 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 CSNK2A3Q8NEV1 391 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 OR4C16Q8NGL9 310 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 GRPEL2Q8TAA5 225 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 ZFAND1Q8TCF1 268 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 RAB3CQ96E17 227 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 TBX15Q96SF7 602 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 OCSTAMPQ9BR26 566 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 GINS4Q9BRT9 223 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 METTL9Q9H1A3 318 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 LPAR5Q9H1C0 372 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 IFT46Q9NQC8 304 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 IL36GQ9NZH8 169 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 ANAPC10Q9UM13 185 aa8.73□□□□□ -1.01
RFC4-201ENST00000296273 NOP16Q9Y3C1 178 aaKnown RBP8.73□□□□□ -1.01
RFC4-201ENST00000296273 IGHV1-69DA0A0B4J2H0 117 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 IGKV1-9A0A0C4DH69 117 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 ZNF816-ZNF321PA0A0X1KG74 233 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 ARPC1BO15143 372 aaKnown RBP8.72□□□□□ -1.01
RFC4-201ENST00000296273 RGS11O94810 467 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 IGHV1-69P01742 117 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 DBHP09172 617 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 GSTT2P0CG29 244 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 HIST1H1DP16402 221 aaKnown RBP8.72□□□□□ -1.01
RFC4-201ENST00000296273 ECI1P42126 302 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 IER3P46695 156 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 RBP2P50120 134 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 ATP1B3P54709 279 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 GNG2P59768 71 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 PLA2G7Q13093 441 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 UBE2V2Q15819 145 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 ZNF626Q68DY1 528 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 TMEM17Q86X19 198 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 SCCPDHQ8NBX0 429 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 BHLHE23Q8NDY6 225 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 PXT1Q8NFP0 134 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 RNF170Q96K19 258 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 C16orf95Q9H693 158 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 HSF4Q9ULV5 492 aa8.72□□□□□ -1.01
RFC4-201ENST00000296273 TRAV38-1A0A0B4J264 116 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 IGHV3-64DA0A0J9YX35 117 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 CRTAPO75718 401 aaPredicted RBP8.71□□□□□ -1.02
RFC4-201ENST00000296273 TSPAN15O95858 294 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 MPIG6BO95866 241 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 NRASP01111 189 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 IGHV4-59P01825 116 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 CD3DP04234 171 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 IFNA6P05013 189 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 GIPP09681 153 aaPredicted RBP8.71□□□□□ -1.02
RFC4-201ENST00000296273 VEGFCP49767 419 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 MTCP1P56278 107 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 TAS2R46P59540 309 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 UBE2MP61081 183 aaKnown RBP8.71□□□□□ -1.02
RFC4-201ENST00000296273 RAP2BP61225 183 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 FCN2Q15485 313 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 VAX1Q5SQQ9 334 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 HIST2H2BDQ6DRA6 164 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 TRAPPC6BQ86SZ2 158 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 C1QL4Q86Z23 238 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 SAXO1Q8IYX7 474 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 ARRDC1Q8N5I2 433 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 NPRL2Q8WTW4 380 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 TNFAIP8L1Q8WVP5 186 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 SNAPC3Q92966 411 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 LHX4Q969G2 390 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 BORCS8Q96FH0 119 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 FYTTD1Q96QD9 318 aaKnown RBP8.71□□□□□ -1.02
RFC4-201ENST00000296273 SELENOIQ9C0D9 397 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 ZNF436Q9C0F3 470 aaPredicted RBP8.71□□□□□ -1.02
RFC4-201ENST00000296273 SIRPDQ9H106 197 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 FN3KRPQ9HA64 309 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 RHOFQ9HBH0 211 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 MRPL15Q9P015 296 aaKnown RBP8.71□□□□□ -1.02
RFC4-201ENST00000296273 RNF7Q9UBF6 113 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 ZNF222Q9UK12 451 aa8.71□□□□□ -1.02
RFC4-201ENST00000296273 hCG_38984A0A1B0GV85 526 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A10PA6NDY2 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 BTBD17A6NE02 478 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A18PA6NE21 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A16PA6NEW6 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A20PA6NIJ5 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A8PA6NJQ4 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A7PA6NKC0 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A22PA8MWA6 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A12PA8MX19 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A5PA8MXJ8 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A23PA8MXZ1 464 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms