RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 GRK1Q15835 563 aa12.58□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF841Q6ZN19 808 aa12.58□□□□□ -0.4
CCDC140-201ENST00000295226 SLC36A1Q7Z2H8 476 aa12.58□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF561Q8N587 486 aa12.58□□□□□ -0.4
CCDC140-201ENST00000295226 SPICQ8N5J4 248 aa12.58□□□□□ -0.4
CCDC140-201ENST00000295226 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.4
CCDC140-201ENST00000295226 HDHD3Q9BSH5 251 aaPredicted RBP12.58□□□□□ -0.4
CCDC140-201ENST00000295226 IFT22Q9H7X7 185 aa12.58□□□□□ -0.4
CCDC140-201ENST00000295226 TRAV39A0A0B4J263 110 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 TMEM235A6NFC5 223 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 CYSRT1A8MQ03 144 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 SNRPGP15A8MWD9 76 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 MCRIP1C9JLW8 97 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 K7N7A8 449 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 PHF1O43189 567 aaPredicted RBP12.57□□□□□ -0.4
CCDC140-201ENST00000295226 NDUFA2O43678 99 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
CCDC140-201ENST00000295226 NDUFB7P17568 137 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 RCVRNP35243 200 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 TAS2R19P59542 299 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 LMO4P61968 165 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 AESQ08117 197 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF260Q3ZCT1 412 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 ST8SIA4Q92187 359 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 SNX22Q96L94 193 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 BEX2Q9BXY8 128 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 PATZ1Q9HBE1 687 aaKnown RBP12.57□□□□□ -0.4
CCDC140-201ENST00000295226 SLC25A10Q9UBX3 287 aaPredicted RBP12.57□□□□□ -0.4
CCDC140-201ENST00000295226 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 AK3Q9UIJ7 227 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 MFNGO00587 321 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 NDUFB3O43676 98 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 SSNA1O43805 119 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 IGHV2-5P01817 119 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 SULT1A3P0DMM9 295 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 SULT1A4P0DMN0 295 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 IFITM2Q01629 132 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 GUCA2AQ02747 115 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 TMEM229BQ8NBD8 167 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
CCDC140-201ENST00000295226 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
CCDC140-201ENST00000295226 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 FOXC2Q99958 501 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 DCTN5Q9BTE1 182 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 DNTTIP1Q9H147 329 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 SEBOXQ9HB31 216 aaPredicted RBP12.57□□□□□ -0.4
CCDC140-201ENST00000295226 KAAG1Q9UBP8 84 aa12.57□□□□□ -0.4
CCDC140-201ENST00000295226 MYO9AB2RTY4 2548 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 MEIKINA0A087WXM9 373 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 FCER2P06734 321 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 MELTFP08582 738 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 GLIPR1P48060 266 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 EDDM3BP56851 147 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 PRSS57Q6UWY2 283 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 GLDNQ6ZMI3 551 aaPredicted RBP12.56□□□□□ -0.4
CCDC140-201ENST00000295226 C5orf24Q7Z6I8 188 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 GRPEL2Q8TAA5 225 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 NUDCD2Q8WVJ2 157 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 COQ2Q96H96 371 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 POM121Q96HA1 1249 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 SPACA1Q9HBV2 294 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 HSF4Q9ULV5 492 aa12.56□□□□□ -0.4
CCDC140-201ENST00000295226 MEIS3P1A6NDR6 274 aa12.55□□□□□ -0.4
CCDC140-201ENST00000295226 F5H0A9 414 aaPredicted RBP12.55□□□□□ -0.4
CCDC140-201ENST00000295226 LRRC10Q5BKY1 277 aa12.55□□□□□ -0.4
CCDC140-201ENST00000295226 SHEQ5VZ18 495 aa12.55□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF782Q6ZMW2 699 aaPredicted RBP12.55□□□□□ -0.4
CCDC140-201ENST00000295226 CCDC107Q8WV48 283 aa12.55□□□□□ -0.4
CCDC140-201ENST00000295226 H1FXQ92522 213 aaKnown RBP12.55□□□□□ -0.4
CCDC140-201ENST00000295226 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
CCDC140-201ENST00000295226 A0A096LNT2 108 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 FAM157AC9JC47 383 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ARPC1BO15143 372 aaKnown RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 CREBL2O60519 120 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 SLC25A16P16260 332 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 USF1P22415 310 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ZFP36P26651 326 aaKnown RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ARFRP1Q13795 201 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 WDR25Q64LD2 544 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 STEAP1BQ6NZ63 245 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 Q6ZPA2 131 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 OR11H7Q8NGC8 314 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 OR4C16Q8NGL9 310 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 OR4K15Q8NH41 348 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 SLC25A21Q9BQT8 299 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 REG4Q9BYZ8 158 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 LPAR2Q9HBW0 351 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 CLN8Q9UBY8 286 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 KIF25Q9UIL4 384 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 SCP2D1Q9UJQ7 156 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ABCA2Q9BZC7 2435 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 MGST3O14880 152 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 SSX5O60225 188 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 GNB2P62879 340 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms