RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 IFNA10P01566 189 aa12.64□□□□□ -0.39
CCNF-201ENST00000293968 DDTP30046 118 aa12.64□□□□□ -0.39
CCNF-201ENST00000293968 PSMF1Q92530 271 aa12.64□□□□□ -0.39
CCNF-201ENST00000293968 POM121Q96HA1 1249 aa12.64□□□□□ -0.39
CCNF-201ENST00000293968 C14orf144Q96I85 54 aa12.64□□□□□ -0.39
CCNF-201ENST00000293968 ZNF732B4DXR9 585 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
CCNF-201ENST00000293968 IL24Q13007 206 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 MKXQ8IYA7 352 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 PSENENQ9NZ42 101 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 A0A087WWC5 75 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 LOC102723971A0A1B0GUV8 181 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 A0A1B0GW64 132 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 A0A1W2PQM1 296 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 HLA-BQ31612 363 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 IGHV5-10-1A0A0J9YXX1 117 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 C5orf49A4QMS7 147 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 BCL2P10415 239 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 NTF4P34130 210 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 RAC1P63000 192 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 BAXQ07812 192 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 PRDX4Q13162 271 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 WIPI1Q5MNZ9 446 aaPredicted RBP12.63□□□□□ -0.39
CCNF-201ENST00000293968 SLC23A3Q6PIS1 610 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 ABHD3Q8WU67 409 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 GPR146Q96CH1 333 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 WNT5BQ9H1J7 359 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 SLC39A9Q9NUM3 307 aa12.63□□□□□ -0.39
CCNF-201ENST00000293968 ELOA3CA0A087WX78 387 aaPredicted RBP12.62□□□□□ -0.39
CCNF-201ENST00000293968 GJE1A6NN92 205 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 P04436 131 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 CST2P09228 141 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 SSX2Q16385 188 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 OR10J5Q8NHC4 309 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 LHX4Q969G2 390 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 hCG_38984A0A1B0GV85 526 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 A0A1W2PPQ1 181 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 ZNF385CQ66K41 422 aaPredicted RBP12.62□□□□□ -0.39
CCNF-201ENST00000293968 CADM4Q8NFZ8 388 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 TMEM56Q96MV1 263 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 YPEL4Q96NS1 127 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 PRDM13Q9H4Q3 707 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 TMEM56-RWDD3S4R434 201 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 A0A0G2JRQ6 117 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 KIR2DS1A0A191URI9 304 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 UBE2L5PA0A1B0GUS4 154 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 WDR1O75083 606 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 KIR2DS4P43632 304 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 PCBD1P61457 104 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 HIST1H3AP68431 136 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 KIR2DS1Q14954 304 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 TMEM37Q8WXS4 190 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 C9J4A7 227 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 CYTIPO60759 359 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 PGLYRP1O75594 196 aaPredicted RBP12.62□□□□□ -0.39
CCNF-201ENST00000293968 TUSC2O75896 110 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 IFNA1P01562 189 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 BMP5P22003 454 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 OR8B8Q15620 311 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 Q9N2K0 584 aa12.62□□□□□ -0.39
CCNF-201ENST00000293968 A0A0G2JMM0 328 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 A0A1W2PPB8 328 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 A0A1W2PRS3 328 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 MAP1LC3B2A6NCE7 125 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 KIR3DP1A8MWS1 328 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 PLA2G5P39877 138 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 PKIAP61925 76 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 NCR3LG1Q68D85 454 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 MAP1LC3BQ9GZQ8 125 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 CLDN1O95832 211 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 OTX2P32243 289 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 ID3Q02535 119 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 SIGLEC12Q96PQ1 595 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 NDUFB7P17568 137 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 ZNF66Q6ZN08 573 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 OR10D3Q8NH80 312 aa12.61□□□□□ -0.39
CCNF-201ENST00000293968 C10orf142B7Z368 130 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 CBR3O75828 277 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 CYB5R3P00387 301 aaPredicted RBP12.6□□□□□ -0.39
CCNF-201ENST00000293968 CD55P08174 381 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 EDN3P14138 238 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 IL2RGP31785 369 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 HERPUD1Q15011 391 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 PCOLCEQ15113 449 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 IGFBP7Q16270 282 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 RBKSQ9H477 322 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 SLC25A22Q9H936 323 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 TAAR3PQ9P1P4 343 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 OR14J1Q9UGF5 321 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 DIDO1Q9BTC0 2240 aaKnown RBP12.6□□□□□ -0.39
CCNF-201ENST00000293968 XKRY2A2RUG3 117 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 SYNGR1O43759 233 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 GDF1P27539 372 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 RAC3P60763 192 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 WFIKKN1Q96NZ8 548 aa12.6□□□□□ -0.39
CCNF-201ENST00000293968 HIST1H2BLQ99880 126 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms