RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 BTNL3Q6UXE8 466 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 EIF4E3Q8N5X7 224 aaKnown RBP13.68□□□□□ -0.22
SMAD6-201ENST00000288840 WSB1Q9Y6I7 421 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 AGFG2O95081 481 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 SULT1A1P50225 295 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 BAXQ07812 192 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 TMEM251Q8N6I4 163 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 TMEM252Q8N6L7 170 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 TAAR9Q96RI9 348 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 UBE2L5PA0A1B0GUS4 154 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 CYB5BO43169 146 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 RHBDL1O75783 438 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 TRA2AQ13595 282 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMAD6-201ENST00000288840 KCNMB1Q16558 191 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 TBC1D28Q2M2D7 210 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 NUFIP2Q7Z417 695 aaKnown RBP13.68□□□□□ -0.22
SMAD6-201ENST00000288840 DEFB108BQ8NET1 73 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 OR2J1Q9GZK6 312 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 PARP11Q9NR21 331 aa13.68□□□□□ -0.22
SMAD6-201ENST00000288840 DBX1A6NMT0 343 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 P2RY1P47900 373 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 IL13RA2Q14627 380 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 TTTY12Q9BZ98 90 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 IFT22Q9H7X7 185 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 FOXJ2Q9P0K8 574 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 CCL1P22362 96 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 S100PP25815 95 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 NKX6-1P78426 367 aaPredicted RBP13.67□□□□□ -0.22
SMAD6-201ENST00000288840 CST9LP1Q5W188 147 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF826PQ6ZT77 177 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF429Q86V71 674 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 TM2D1Q9BX74 207 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 WFDC1Q9HC57 220 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 OR1A1Q9P1Q5 309 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 IGKV1D-13A0A0B4J2D9 117 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 LY6G6EA0A0G2JKS1 128 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 hCG_38984A0A1B0GV85 526 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 TFF1P04155 84 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 CD63P08962 238 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 IGKV1-13P0DP09 117 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 GCH1P30793 250 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 ARR3P36575 388 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
SMAD6-201ENST00000288840 U3KQA8 63 aa13.67□□□□□ -0.22
SMAD6-201ENST00000288840 ABCA4P78363 2273 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 PRSS44E7EML9 344 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 H0YL77 283 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 RPL36A-HNRNPH2H7BZ11 118 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 Q0VFX4 171 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 DCAF10Q5QP82 559 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF787Q6DD87 383 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 RBMS3Q6XE24 437 aaKnown RBP13.66□□□□□ -0.22
SMAD6-201ENST00000288840 FBLN5Q9UBX5 448 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 PIEZO2Q9H5I5 2752 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 TRDCB7Z8K6 153 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 FAM157CP0CG43 387 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 G0S2P27469 103 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 OR3A1P47881 315 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 HMGN3Q15651 99 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 TMEM211Q6ICI0 200 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 LINC00518Q8N0U6 118 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 DMBX1Q8NFW5 382 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 LHX4Q969G2 390 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 MOB3AQ96BX8 217 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 C10orf35Q96D05 121 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 ADGRG7Q96K78 797 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 STRAPQ9Y3F4 350 aaKnown RBP13.66□□□□□ -0.22
SMAD6-201ENST00000288840 IGLV3-32A0A0A0MS00 114 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 RBFOX3A6NFN3 312 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 VDAC1P21796 283 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 MDP1Q86V88 176 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 USB1Q9BQ65 265 aaKnown RBP13.66□□□□□ -0.22
SMAD6-201ENST00000288840 RTL8AQ9BWD3 113 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 MSL2Q9HCI7 577 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 CACFD1Q9UGQ2 172 aa13.66□□□□□ -0.22
SMAD6-201ENST00000288840 TRGV5A0A0B4J1U4 118 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 CLEC18AA5D8T8 446 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 ERVS71-1P61550 626 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 CLEC18CQ8NCF0 446 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 MRGPRDQ8TDS7 321 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 MTCH1Q9NZJ7 389 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 FOXD3Q9UJU5 478 aaPredicted RBP13.65□□□□□ -0.22
SMAD6-201ENST00000288840 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF716A6NP11 495 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 FGF16O43320 207 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 HNF1AP20823 631 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 ZNF561Q8N587 486 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 CYB561D1Q8N8Q1 229 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 TREM2Q9NZC2 230 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 SEMA5BQ9P283 1151 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 HIST3H3Q16695 136 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 HFEQ30201 348 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 WBP1Q96G27 269 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 NUDT16L1Q9BRJ7 211 aaKnown RBP13.65□□□□□ -0.22
SMAD6-201ENST00000288840 PROK2Q9HC23 129 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 GAB2Q9UQC2 676 aa13.65□□□□□ -0.22
SMAD6-201ENST00000288840 WDFY4Q6ZS81 3184 aa13.65□□□□□ -0.23
SMAD6-201ENST00000288840 CTXN2P0C2S0 81 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms