RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 MRPL21Q7Z2W9 205 aaKnown RBP11.1□□□□□ -0.63
ZIC3-201ENST00000287538 UNKLQ9H9P5 680 aaKnown RBP11.1□□□□□ -0.63
ZIC3-201ENST00000287538 TP53TG5Q9Y2B4 290 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 LOC102725191A0A1B0GVB3 256 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 CDC14BO60729 498 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 FSTP19883 344 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 THBS4P35443 961 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 LBHQ53QV2 105 aaPredicted RBP11.1□□□□□ -0.63
ZIC3-201ENST00000287538 RARRES2Q99969 163 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 GAPDHP04406 335 aaKnown RBP11.1□□□□□ -0.63
ZIC3-201ENST00000287538 GLRA1P23415 457 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 C4orf17Q53FE4 359 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 HIST2H3PS2Q5TEC6 136 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 OR56B2PQ8NGI1 322 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 ERGIC1Q969X5 290 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 SPRR3Q9UBC9 169 aa11.1□□□□□ -0.63
ZIC3-201ENST00000287538 OR7C1O76099 320 aaPredicted RBP11.09□□□□□ -0.63
ZIC3-201ENST00000287538 DANCRP0C864 163 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
ZIC3-201ENST00000287538 FAAP24Q9BTP7 215 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 MRPL37Q9BZE1 423 aaKnown RBP11.09□□□□□ -0.63
ZIC3-201ENST00000287538 LPAR5Q9H1C0 372 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 BCO1Q9HAY6 547 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 SMCO3A2RU48 225 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 PPP1CCP36873 323 aaKnown RBP11.09□□□□□ -0.63
ZIC3-201ENST00000287538 UBE2KP61086 200 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 PCBD1P61457 104 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 ELOBQ15370 118 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 C1orf100Q5SVJ3 147 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 SLC25A26Q70HW3 274 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 PRSS33Q8NF86 280 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 BSCL2Q96G97 398 aaPredicted RBP11.09□□□□□ -0.63
ZIC3-201ENST00000287538 FZR1Q9UM11 496 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 SLC7A11Q9UPY5 501 aa11.09□□□□□ -0.63
ZIC3-201ENST00000287538 ELOA3CA0A087WX78 387 aaPredicted RBP11.08□□□□□ -0.64
ZIC3-201ENST00000287538 A0A0A6YYD4 124 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 ZNF503-AS2A6NEH8 195 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 PTBP3O95758 552 aaKnown RBP11.08□□□□□ -0.64
ZIC3-201ENST00000287538 TBPP20226 339 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 PIGYQ3MUY2 71 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 PLAC9Q5JTB6 97 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 TOMM40LQ969M1 308 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 PTX4Q96A99 478 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 RAB39BQ96DA2 213 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 PRRX2Q99811 253 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 RTBDNQ9BSG5 229 aaPredicted RBP11.08□□□□□ -0.64
ZIC3-201ENST00000287538 SYNGR3O43761 229 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 AGFG2O95081 481 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 BPNT1O95861 308 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 IL2RGP31785 369 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 TNFSF10P50591 281 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 GPM6AP51674 278 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 FXYD4P59646 89 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 ERVFRD-1P60508 538 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 NUTF2P61970 127 aaKnown RBP11.08□□□□□ -0.64
ZIC3-201ENST00000287538 HSD17B11Q8NBQ5 300 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 FAM213BQ8TBF2 198 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 TMED3Q9Y3Q3 217 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 H3BQ15 152 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 CST2P09228 141 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 IL15RAQ13261 267 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 GGNBP1Q5YKI7 109 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 FBXL14Q8N1E6 418 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 SH3BGRL3Q9H299 93 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 ZNF442Q9H7R0 627 aa11.08□□□□□ -0.64
ZIC3-201ENST00000287538 ZNF71Q9NQZ8 489 aaPredicted RBP11.08□□□□□ -0.64
ZIC3-201ENST00000287538 HPNP05981 417 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 TRGC1P0CF51 173 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 TMEM50BP56557 158 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 CD81P60033 236 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 C5orf24Q7Z6I8 188 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 OR5H2Q8NGV7 314 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 EHFQ9NZC4 300 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 BORCS7-ASMTA0A0B4J1R7 106 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 SELEP16581 610 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 FPR2P25090 351 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 UCP2P55851 309 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 KCNMB1Q16558 191 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 CHRFAM7AQ494W8 412 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 ABLIM2Q6H8Q1 611 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 PIP4P1Q86T03 277 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 ZNF488Q96MN9 340 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 PPP1R14DQ9NXH3 145 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 ZNF724A8MTY0 619 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 RPL36A-HNRNPH2H7BZ11 118 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 APLNRP35414 380 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 UBE2NP61088 152 aaKnown RBP11.07□□□□□ -0.64
ZIC3-201ENST00000287538 NHLH2Q02577 135 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 TMEM182Q6ZP80 229 aaPredicted RBP11.07□□□□□ -0.64
ZIC3-201ENST00000287538 UBALD1Q8TB05 177 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 SCGB3A2Q96PL1 93 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 HIST1H2AAQ96QV6 131 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 ASCL3Q9NQ33 180 aa11.07□□□□□ -0.64
ZIC3-201ENST00000287538 TNRC6AQ8NDV7 1962 aaKnown RBP11.06□□□□□ -0.64
ZIC3-201ENST00000287538 OR6C6A6NF89 314 aa11.06□□□□□ -0.64
ZIC3-201ENST00000287538 H0YL77 283 aa11.06□□□□□ -0.64
ZIC3-201ENST00000287538 FRZBQ92765 325 aa11.06□□□□□ -0.64
ZIC3-201ENST00000287538 RCL1Q9Y2P8 373 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms