RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 CDC34P49427 236 aaPredicted RBP16.12■□□□□ 0.17
PCDH1-201ENST00000287008 SLC25A47Q6Q0C1 308 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 CTDSPLO15194 276 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 SYNGR1O43759 233 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 IGKV3-11P04433 115 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 CRHP06850 196 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 ADRB1P08588 477 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 CYB5R1Q9UHQ9 305 aa16.12■□□□□ 0.17
PCDH1-201ENST00000287008 TRIM77I1YAP6 450 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 GDF9O60383 454 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 SPP1P10451 314 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 LIMS1P48059 325 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 IL24Q13007 206 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 OR1L8Q8NGR8 309 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 DTD1Q8TEA8 209 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 ZNF107Q9UII5 783 aaPredicted RBP16.11■□□□□ 0.17
PCDH1-201ENST00000287008 CACNA1DQ01668 2161 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 TGOLN2O43493 480 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 RBM11P57052 281 aaKnown RBP16.11■□□□□ 0.17
PCDH1-201ENST00000287008 OR1K1Q8NGR3 316 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 DIDO1Q9BTC0 2240 aaKnown RBP16.11■□□□□ 0.17
PCDH1-201ENST00000287008 SPNP16150 400 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 COL10A1Q03692 680 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 BLNKQ8WV28 456 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 MARVELD1Q9BSK0 173 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 PIKFYVEQ9Y2I7 2098 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 CSRP1P21291 193 aaKnown RBP16.11■□□□□ 0.17
PCDH1-201ENST00000287008 TEX30Q5JUR7 227 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 SCNM1Q9BWG6 230 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 RHOFQ9HBH0 211 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 GAR1Q9NY12 217 aaKnown RBP16.11■□□□□ 0.17
PCDH1-201ENST00000287008 ZDHHC8Q9ULC8 765 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 PARP14Q460N5 1801 aa16.11■□□□□ 0.17
PCDH1-201ENST00000287008 WDR90Q96KV7 1748 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 IFNL4K9M1U5 179 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 NDUFA2O43678 99 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 CLEC18BQ6UXF7 455 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 ZNF714Q96N38 554 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 KLHDC2Q9Y2U9 406 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 C19orf57Q0VDD7 668 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 ZNF658BQ4V348 819 aaPredicted RBP16.1■□□□□ 0.17
PCDH1-201ENST00000287008 OR8I2Q8N0Y5 310 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 PGLYRP3Q96LB9 341 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 CLCF1Q9UBD9 225 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 WSB1Q9Y6I7 421 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 MIA3Q5JRA6 1907 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 GSTZ1O43708 216 aaPredicted RBP16.1■□□□□ 0.17
PCDH1-201ENST00000287008 ATP5J2P56134 94 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 NANOS3P60323 173 aaKnown RBP16.1■□□□□ 0.17
PCDH1-201ENST00000287008 TPRX1Q8N7U7 411 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 WDR31Q8NA23 367 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 NFAM1Q8NET5 270 aaPredicted RBP16.1■□□□□ 0.17
PCDH1-201ENST00000287008 Q8WTZ3 238 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 RNF2Q99496 336 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 FOXD3Q9UJU5 478 aaPredicted RBP16.1■□□□□ 0.17
PCDH1-201ENST00000287008 PPP1CCP36873 323 aaKnown RBP16.1■□□□□ 0.17
PCDH1-201ENST00000287008 GAMTQ14353 236 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 MIDNQ504T8 468 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 SSX7Q7RTT5 188 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 CLEC5AQ9NY25 188 aa16.1■□□□□ 0.17
PCDH1-201ENST00000287008 K7N7A8 449 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 GYPAP02724 150 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 KIR3DL2P43630 455 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 OR10A7Q8NGE5 316 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 CHODLQ9H9P2 273 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 FBXL17Q9UF56 701 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 KCNE5Q9UJ90 142 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 SLC6A1P30531 599 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 MPV17P39210 176 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 TMEM91Q6ZNR0 172 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 TIMP4Q99727 224 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 A0A1W2PNV4 684 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 REG1BP48304 166 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 UBE2L3P68036 154 aaKnown RBP16.09■□□□□ 0.17
PCDH1-201ENST00000287008 ROM1Q03395 351 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 GUK1Q16774 197 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 OR10G4Q8NGN3 311 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 OR10G9Q8NGN4 311 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 OR10G7Q8NGN6 311 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 MRGPRFQ96AM1 343 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 MDC1Q14676 2089 aaKnown RBP16.09■□□□□ 0.17
PCDH1-201ENST00000287008 RAB29O14966 203 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 INHBBP09529 407 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 IRF3Q14653 427 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 ST6GALNAC2Q9UJ37 374 aa16.09■□□□□ 0.17
PCDH1-201ENST00000287008 ALX3O95076 343 aa16.08■□□□□ 0.17
PCDH1-201ENST00000287008 HOXA6P31267 233 aa16.08■□□□□ 0.17
PCDH1-201ENST00000287008 NUBP1P53384 320 aa16.08■□□□□ 0.17
PCDH1-201ENST00000287008 ECSCRQ19T08 205 aa16.08■□□□□ 0.17
PCDH1-201ENST00000287008 PRSS53Q2L4Q9 553 aa16.08■□□□□ 0.17
PCDH1-201ENST00000287008 ZDHHC11Q9H8X9 412 aa16.08■□□□□ 0.17
PCDH1-201ENST00000287008 BDP1A6H8Y1 2624 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 CHST1O43916 411 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 FGF12P61328 243 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 APCDD1LQ8NCL9 501 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 DUSP18Q8NEJ0 188 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 OR1B1Q8NGR6 318 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 ICMTO60725 284 aa16.08■□□□□ 0.16
PCDH1-201ENST00000287008 ZXDCQ2QGD7 858 aaPredicted RBP16.08■□□□□ 0.16
PCDH1-201ENST00000287008 OR8G5Q8NG78 346 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms