RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SMCO1Q147U7 214 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 LTC4SQ16873 150 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 ZNF695Q8IW36 515 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-201ENST00000279247 MSI2Q96DH6 328 aaKnown RBP15.16■□□□□ 0.02
CAPN1-201ENST00000279247 RSRP1Q9BUV0 290 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 SDHAF2Q9NX18 166 aa15.16■□□□□ 0.02
CAPN1-201ENST00000279247 PRRG2O14669 202 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 PTBP3O95758 552 aaKnown RBP15.15■□□□□ 0.02
CAPN1-201ENST00000279247 IGLV1-44P01699 117 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 ASCL1P50553 236 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 HLA-DRB3P79483 266 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 PCSK4Q6UW60 755 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 C11orf53Q8IXP5 236 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 LGI3Q8N145 548 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 FAM57AQ8TBR7 257 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 PPP1R3CQ9UQK1 317 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 K7ENP7 123 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 GABRA2P47869 451 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 ERVK11-1P61568 191 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 DOLPP1Q86YN1 238 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 CNTNAP3BQ96NU0 1288 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 CNTNAP3Q9BZ76 1288 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 MAGT1Q9H0U3 335 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 CXXC4Q9H2H0 198 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 ASF1BQ9NVP2 202 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 RNF150Q9ULK6 438 aa15.15■□□□□ 0.02
CAPN1-201ENST00000279247 ACACBO00763 2458 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 IGHV3OR15-7A0A075B7D8 119 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 GPR31O00270 319 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 SNAPC5O75971 98 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 MBPP02686 304 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-201ENST00000279247 OR8U9P0C7N5 309 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 EPHA1P21709 976 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 PMELP40967 661 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 IZUMO4Q1ZYL8 232 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 WDR82Q6UXN9 313 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 Q8NA96 180 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 OR8U1Q8NH10 309 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 RFESDQ8TAC1 157 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 LRRC29Q8WV35 223 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 TAF9BQ9HBM6 251 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 NKX2-6A6NCS4 301 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 SIGLEC5O15389 551 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 PET100P0DJ07 73 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 FAM201AQ5SY85 155 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 Q8IYB0 196 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 GALNT14Q96FL9 552 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 DHRS9Q9BPW9 319 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 SUCNR1Q9BXA5 334 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 PFDN2Q9UHV9 154 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 KIF25Q9UIL4 384 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 K7EPK0 472 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 ATXN7O15265 892 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-201ENST00000279247 P2RX3P56373 397 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 LINC00596Q86U02 117 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 FAM71E2Q8N5Q1 922 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 SNRNP40Q96DI7 357 aaKnown RBP15.14■□□□□ 0.01
CAPN1-201ENST00000279247 AMDHD2Q9Y303 409 aa15.14■□□□□ 0.01
CAPN1-201ENST00000279247 CACNA1AO00555 2505 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 ZSCAN5BA6NJL1 495 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 KRTCAP3Q53RY4 240 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 WFDC8Q8IUA0 241 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 MRGPRDQ8TDS7 321 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 RBPMSQ93062 196 aaKnown RBP15.13■□□□□ 0.01
CAPN1-201ENST00000279247 DCTN5Q9BTE1 182 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 RIMS4Q9H426 269 aaPredicted RBP15.13■□□□□ 0.01
CAPN1-201ENST00000279247 TAAR3PQ9P1P4 343 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 FBXO24O75426 580 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 OR3A1P47881 315 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 TIMM23BQ5SRD1 257 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 RPL7L1Q6DKI1 246 aaKnown RBP15.13■□□□□ 0.01
CAPN1-201ENST00000279247 FIP1L1Q6UN15 594 aaKnown RBP15.13■□□□□ 0.01
CAPN1-201ENST00000279247 CMTM1Q8IZ96 169 aa15.13■□□□□ 0.01
CAPN1-201ENST00000279247 SPTBN1Q01082 2364 aaKnown RBP15.12■□□□□ 0.01
CAPN1-201ENST00000279247 A0A0G2JNJ9 132 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 PRSS44E7EML9 344 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 RPL12P30050 165 aaKnown RBP15.12■□□□□ 0.01
CAPN1-201ENST00000279247 CEACAM6P40199 344 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 UCP3P55916 312 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 IL15RAQ13261 267 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 OR1L1Q8NH94 360 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 USB1Q9BQ65 265 aaKnown RBP15.12■□□□□ 0.01
CAPN1-201ENST00000279247 Q9UFV3 132 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 OR2W1Q9Y3N9 320 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 IGHV3-43A0A0B4J1X8 118 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 IGHV3-13P01766 116 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 IGHV3-7P01780 117 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 IGHV3-43DP0DP04 118 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 TIMP3P35625 211 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 PKD1L2Q7Z442 2459 aa15.12■□□□□ 0.01
CAPN1-201ENST00000279247 BSCL2Q96G97 398 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-201ENST00000279247 TMEM210A6NLX4 147 aa15.11■□□□□ 0.01
CAPN1-201ENST00000279247 ZNF146Q15072 292 aa15.11■□□□□ 0.01
CAPN1-201ENST00000279247 OR2B11Q5JQS5 317 aa15.11■□□□□ 0.01
CAPN1-201ENST00000279247 THOC7Q6I9Y2 204 aaKnown RBP15.11■□□□□ 0.01
CAPN1-201ENST00000279247 ZNF497Q6ZNH5 498 aa15.11■□□□□ 0.01
CAPN1-201ENST00000279247 OR4A4PQ8NGN8 299 aa15.11■□□□□ 0.01
CAPN1-201ENST00000279247 RNASE11Q8TAA1 199 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms