RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 VSX2P58304 361 aaPredicted RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 ESRRGP62508 458 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 ZNF92Q03936 586 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 HNRNPA0Q13151 305 aaKnown RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 PPP1R1AQ13522 171 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 FASTKQ14296 549 aaKnown RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 KCNJ11Q14654 390 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 C16orf72Q14CZ0 275 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 ECSCRQ19T08 205 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 CLEC12BQ2HXU8 276 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 NSUN5P1Q3KNT7 163 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 ARHGAP11BQ3KRB8 267 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 TMEM30BQ3MIR4 351 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 REP15Q6BDI9 236 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 Q6ZVH6 145 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 FAM231DQ6ZW35 169 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 FAM220AQ7Z4H9 259 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 KLHDC8BQ8IXV7 354 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 SAMD12Q8N8I0 201 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 OR10R2Q8NGX6 335 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 ZFAND1Q8TCF1 268 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 C11orf40Q8WZ69 217 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 NEUROG1Q92886 237 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 UCN3Q969E3 161 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 TMBIM1Q969X1 311 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 SLC25A38Q96DW6 304 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 DCUN1D1Q96GG9 259 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 MED18Q9BUE0 208 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 WDR13Q9H1Z4 485 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 OR51I1Q9H343 314 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 CLMPQ9H6B4 373 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 WDR41Q9HAD4 459 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 B3GAT2Q9NPZ5 323 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 BIN3Q9NQY0 253 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 ARMCX1Q9P291 453 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 SLC23A2Q9UGH3 650 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 C14orf166Q9Y224 244 aaKnown RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 PCYT1BQ9Y5K3 369 aaPredicted RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 DOCK4Q8N1I0 1966 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 CHD5Q8TDI0 1954 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 TRPM6Q9BX84 2022 aa3.65□□□□□ -1.83
CD44-202ENST00000278385 TPRP12270 2363 aaKnown RBP3.65□□□□□ -1.83
CD44-202ENST00000278385 IGKV1D-8A0A087WSZ0 117 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 IQCMA0A1B0GVH7 501 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 DHRS7CA6NNS2 312 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 INAFM1C9JVW0 142 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 MFNGO00587 321 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 CHP2O43745 196 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 FOXH1O75593 365 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 IFNA1P01562 189 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 IGHV3-9P01782 118 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 KLK3P07288 261 aaPredicted RBP3.64□□□□□ -1.83
CD44-202ENST00000278385 GIPP09681 153 aaPredicted RBP3.64□□□□□ -1.83
CD44-202ENST00000278385 PGA5P0DJD9 388 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 C1GALT1C1LP0DN25 315 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 IGHV4-38-2P0DP08 117 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 CCL4P13236 92 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 DAOP14920 347 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 CEACAM8P31997 349 aaPredicted RBP3.64□□□□□ -1.83
CD44-202ENST00000278385 CCR7P32248 378 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 GCKP35557 465 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 OR1D4P47884 311 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 GNG3P63215 75 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 SLC35A1P78382 337 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 TGIF1Q15583 401 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 FAM182AQ5T1J6 154 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 FAM219BQ5XKK7 198 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 RUSC1-AS1Q66K80 236 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 TNFAIP8L2Q6P589 184 aaPredicted RBP3.64□□□□□ -1.83
CD44-202ENST00000278385 SMARCD3Q6STE5 483 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 BAIAP2L2Q6UXY1 529 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 COMMD7Q86VX2 200 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 P2RY8Q86VZ1 359 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 RAB43Q86YS6 212 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 FTMTQ8N4E7 242 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 OR51G1Q8NGK1 321 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 OR6T1Q8NGN1 323 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 OR51E1Q8TCB6 317 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 RDH5Q92781 318 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 TMEM54Q969K7 222 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 C12orf43Q96C57 262 aaKnown RBP3.64□□□□□ -1.83
CD44-202ENST00000278385 PPCDCQ96CD2 204 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 SMIM12Q96EX1 92 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 PIK3IP1Q96FE7 263 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 BTF3L4Q96K17 158 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 PGLYRP3Q96LB9 341 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 TBL1YQ9BQ87 522 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 OR11A1Q9GZK7 315 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 SH2D2AQ9NP31 389 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 IL1RAPQ9NPH3 570 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 SLC7A10Q9NS82 523 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 OCIAD1Q9NX40 245 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 GSKIPQ9P0R6 139 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 RAB22AQ9UL26 194 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 UFC1Q9Y3C8 167 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 LSM5Q9Y4Y9 91 aaKnown RBP3.64□□□□□ -1.83
CD44-202ENST00000278385 HEBP2Q9Y5Z4 205 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms