RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 HSF4Q9ULV5 492 aa10.05□□□□□ -0.8
CLSTN3-201ENST00000266546 LIPT2A6NK58 231 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 CXCL13O43927 109 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 MST1P26927 711 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 CLDN15P56746 228 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 UBE2G2P60604 165 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 EGR4Q05215 589 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 OR2M3Q8NG83 312 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 OR6X1Q8NH79 312 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 RNF126Q9BV68 326 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 NGBQ9NPG2 151 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 F8VVB4 439 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 F8VWA3 439 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 COX6A1P12074 109 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 DTYMKP23919 212 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 CCKARP32238 428 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 KRTDAPP60985 99 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 RAC1P63000 192 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 RUNX1Q01196 453 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF441Q8N8Z8 693 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 OR1F12Q8NHA8 337 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 ERGIC1Q969X5 290 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 ALKBH3Q96Q83 286 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 RARRES2Q99969 163 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 VAX2Q9UIW0 290 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 SONP18583 2426 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 SPG11Q96JI7 2443 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 CXorf65A6NEN9 183 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 DNPH1O43598 174 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 CD59P13987 128 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 NTF3P20783 257 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 SUMO1P63165 101 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 RNF151Q2KHN1 245 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 SSX7Q7RTT5 188 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 VASH2Q86V25 355 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 PPP1R35Q8TAP8 253 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 RSPO3Q9BXY4 272 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 HIPK2Q9H2X6 1198 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 CALHM2Q9HA72 323 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 G6PC2Q9NQR9 355 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 KCNIP2Q9NS61 270 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 LY6G6EA0A0G2JKS1 128 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 TMEM14DPA8MWL7 114 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 UBE2CO00762 179 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 UNC119Q13432 240 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 PHYHD1Q5SRE7 291 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 LINC00114Q6XXX2 140 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 GCNT2Q8N0V5 402 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 OR4A16Q8NH70 328 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 ANGPTL4Q9BY76 406 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 SLC25A22Q9H936 323 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 GNG12Q9UBI6 72 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 CACNG5Q9UF02 275 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 STARD10Q9Y365 291 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 U3KQA8 63 aa10.04□□□□□ -0.8
CLSTN3-201ENST00000266546 TGIF2-C20orf24A0A0A6YYL0 155 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 A0A1W2PNV4 684 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 RND3P61587 244 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 ZP4Q12836 540 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 SLC35E3Q7Z769 313 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 TMEM252Q8N6L7 170 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 NOL4LQ96MY1 436 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 TIMP4Q99727 224 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 OBP2BQ9NPH6 170 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 ERRFI1Q9UJM3 462 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 FUT9Q9Y231 359 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 COLCA2A8K830 154 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 H0YIZ8 118 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 HSPB1P04792 205 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 FTH1P19P0C7X4 201 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF17P17021 662 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 SLC38A11Q08AI6 406 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 GAMTQ14353 236 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 C21orf62-AS1Q17RA5 79 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 REC114Q7Z4M0 266 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF808Q8N4W9 903 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 TUBA4BQ9H853 241 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 FKBP11Q9NYL4 201 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 SNRNP200O75643 2136 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF891A8MT65 544 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF735P0CB33 412 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 IRF2P14316 349 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 SLC10A1Q14973 349 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 RAB35Q15286 201 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 LBHQ53QV2 105 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 BIVMQ86UB2 503 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 CHST5Q9GZS9 411 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 DEFB127Q9H1M4 99 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 BPTFQ12830 3046 aa10.03□□□□□ -0.8
CLSTN3-201ENST00000266546 DUXBA0A1W2PPF3 345 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 C5orf52A6NGY3 159 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 PGA4P0DJD7 388 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 PGA5P0DJD9 388 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 MGST1P10620 155 aaKnown RBP10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 EDN3P14138 238 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 FAM78BQ5VT40 261 aa10.02□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF343Q6P1L6 599 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms