RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 FAM74A7A6NL05 159 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 F2RP25116 425 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 OR8G1Q15617 311 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 GUCA2BQ16661 112 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 CLRN3Q8NCR9 226 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 OBP2BQ9NPH6 170 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 CACFD1Q9UGQ2 172 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 IGSF23A1L1A6 192 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 P0C879 139 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 DVL1P1P54792 670 aaPredicted RBP9.44□□□□□ -0.9
MSH3-201ENST00000265081 CCL28Q9NRJ3 127 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 FAM212BQ9NTI7 297 aaPredicted RBP9.44□□□□□ -0.9
MSH3-201ENST00000265081 DKK4Q9UBT3 224 aa9.44□□□□□ -0.9
MSH3-201ENST00000265081 PROB1E7EW31 1015 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 TOR1AO14656 332 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 OR2H2O95918 312 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 A0A1B0GU03 582 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 PRR33A8MZF0 331 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 IGKV1-39P01597 117 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 IGKV1D-39P04432 117 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 PMP22Q01453 160 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 PSG7Q13046 419 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 ZNF154Q13106 437 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 ZNF169Q14929 603 aaPredicted RBP9.43□□□□□ -0.9
MSH3-201ENST00000265081 HFEQ30201 348 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 OR2C3Q8N628 320 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 NAXEQ8NCW5 288 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 FAM216AQ8WUB2 273 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 PARD6GQ9BYG4 376 aaPredicted RBP9.43□□□□□ -0.9
MSH3-201ENST00000265081 COQ3Q9NZJ6 369 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 BDP1A6H8Y1 2624 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 SIGLEC5O15389 551 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 NKX2-8O15522 239 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 MED6O75586 246 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 TNFSF13O75888 250 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 TMEM50AO95807 157 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 TGFBR3Q03167 851 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 MRPL49Q13405 166 aaKnown RBP9.43□□□□□ -0.9
MSH3-201ENST00000265081 OR2J1Q9GZK6 312 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 PLEKHF2Q9H8W4 249 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 KLF2Q9Y5W3 355 aaPredicted RBP9.43□□□□□ -0.9
MSH3-201ENST00000265081 DOCK7Q96N67 2140 aa9.43□□□□□ -0.9
MSH3-201ENST00000265081 C9JQL5 133 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 RNASEK-C17orf49H0YIS7 233 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 MLNRO43193 412 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 CD200P41217 278 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 ACSF3Q4G176 576 aaPredicted RBP9.42□□□□□ -0.9
MSH3-201ENST00000265081 C9orf106Q8NAJ2 232 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 MBD3L4A6NDZ8 208 aaPredicted RBP9.42□□□□□ -0.9
MSH3-201ENST00000265081 MBD3L3A6NE82 208 aaPredicted RBP9.42□□□□□ -0.9
MSH3-201ENST00000265081 MBD3L5A6NJ08 208 aaPredicted RBP9.42□□□□□ -0.9
MSH3-201ENST00000265081 SRSF6Q13247 344 aaKnown RBP9.42□□□□□ -0.9
MSH3-201ENST00000265081 MBD3L2Q8NHZ7 208 aaPredicted RBP9.42□□□□□ -0.9
MSH3-201ENST00000265081 SLC25A40Q8TBP6 338 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 TMEM171Q8WVE6 324 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 KIRREL1Q96J84 757 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 SMDT1Q9H4I9 107 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 BORCS7-ASMTA0A0B4J1R7 106 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 TRAV17A0A0B4J275 112 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 NHLH2Q02577 135 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 TMPRSS7Q7RTY8 843 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 BATF2Q8N1L9 274 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 OR10V1Q8NGI7 309 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 OR10J5Q8NHC4 309 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 ADAT1Q9BUB4 502 aaKnown RBP9.42□□□□□ -0.9
MSH3-201ENST00000265081 EGLN1Q9GZT9 426 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 COA4Q9NYJ1 87 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 CACNA1GO43497 2377 aa9.42□□□□□ -0.9
MSH3-201ENST00000265081 AHRRA9YTQ3 701 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 ADAM20O43506 726 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 NKX2-1P43699 371 aaPredicted RBP9.41□□□□□ -0.9
MSH3-201ENST00000265081 Q6ZRG5 221 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 KLF14Q8TD94 323 aaPredicted RBP9.41□□□□□ -0.9
MSH3-201ENST00000265081 OR2S2Q9NQN1 319 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 NDRG3Q9UGV2 375 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 A0A0G2JRQ6 117 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 OR8U9P0C7N5 309 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 MPV17P39210 176 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 ERVS71-1P61550 626 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 SEM1Q6ZVN7 128 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 ZNF565Q8N9K5 539 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 OR8U1Q8NH10 309 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 SECTM1Q8WVN6 248 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 SHANK1Q9Y566 2161 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 SNAPINO95295 136 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 CR1LQ2VPA4 569 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 ALKBH6Q3KRA9 238 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 ZNF585BQ52M93 769 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 ZNF695Q8IW36 515 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 NDUFA2O43678 99 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 SFTA3P0C7M3 94 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 TAS2R30P59541 319 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 GNMTQ14749 295 aa9.41□□□□□ -0.9
MSH3-201ENST00000265081 ZNF71Q9NQZ8 489 aaPredicted RBP9.41□□□□□ -0.9
MSH3-201ENST00000265081 OR1A1Q9P1Q5 309 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms