RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CD27P26842 260 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 OPRM1P35372 400 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 NEIL1Q96FI4 390 aaPredicted RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 WDR61Q9GZS3 305 aaKnown RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 LSM2Q9Y333 95 aaKnown RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 PPIL1Q9Y3C6 166 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 HSPB1P04792 205 aaKnown RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 HYAL1Q12794 435 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 GPBAR1Q8TDU6 330 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 COL25A1Q9BXS0 654 aaPredicted RBP5.06□□□□□ -1.6
VCAN-201ENST00000265077 A0A087WWC5 75 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 J3KRW8 73 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ESDP10768 282 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 PI3P19957 117 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 IL13RA2Q14627 380 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ZNF750Q32MQ0 723 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ST3GAL6Q9Y274 331 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 EFSO43281 561 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 KIR2DS2P43631 304 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 DEFB103AP81534 67 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 EDDM3AQ14507 147 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ROBO4Q8WZ75 1007 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 A0A1B0GTL3 188 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 TMEM238LA0A1B0GVL6 79 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ZNF253O75346 499 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 NUDT3O95989 172 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 CCR2P41597 374 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 GUCA2AQ02747 115 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 FUT7Q11130 342 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 INSL4Q14641 139 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 OSR2Q8N2R0 312 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 WFDC5Q8TCV5 224 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ERGIC1Q969X5 290 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 C10orf35Q96D05 121 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 POM121L2Q96KW2 1035 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 FBXO34Q9NWN3 711 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 SEMA5BQ9P283 1151 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 HSPB8Q9UJY1 196 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 PEX11BO96011 259 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 GLRA1P23415 457 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 SELENOTP62341 195 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 RLN3Q8WXF3 142 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 NAA60Q9H7X0 242 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 ELOVL5Q9NYP7 299 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 OR51B2Q9Y5P1 312 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 BRWD3Q6RI45 1802 aa5.06□□□□□ -1.6
VCAN-201ENST00000265077 TNFSF15O95150 251 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 RPS4Y1P22090 263 aaKnown RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 EMP1P54849 157 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 OLIG3Q7RTU3 272 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 EMC6Q9BV81 110 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 PARLQ9H300 379 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 PIEZO2Q9H5I5 2752 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 SIRPB1O00241 398 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 GLI4P10075 376 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 HIKESHIQ53FT3 197 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 SLC25A26Q70HW3 274 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 SLC25A42Q86VD7 318 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 OR10X1Q8NGY0 326 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 VCX2Q9H322 139 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 B3GALT4O96024 378 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 CA2P00918 260 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 CD74P04233 296 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H1EP10412 219 aaKnown RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 IAPPP10997 89 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 KIAA0040Q15053 153 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 PELI1Q96FA3 418 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 PCGF1Q9BSM1 259 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 SEPSECSQ9HD40 501 aaKnown RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 IFITM10A6NMD0 228 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 OGG1O15527 345 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 FTH1P19P0C7X4 201 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 EDDM3BP56851 147 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 ADAT3Q96EY9 351 aaPredicted RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 FAM234AQ9H0X4 552 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 SPANXA1Q9NS26 97 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 TNFSF13O75888 250 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 BCL2P10415 239 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 WDR38Q5JTN6 314 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 NEU3Q9UQ49 428 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 RCL1Q9Y2P8 373 aaKnown RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 SFT2D2O95562 160 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 ZNF385AQ96PM9 386 aaKnown RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 MAP1LC3CQ9BXW4 147 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 GTSF1LQ9H1H1 148 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 TMEM30AQ9NV96 361 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 SOX21Q9Y651 276 aaPredicted RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 PIEZO1Q92508 2521 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 ZP1P60852 638 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 AGERQ15109 404 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 HEPN1Q6WQI6 88 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 OR5A1Q8NGJ0 315 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 CLDN23Q96B33 292 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 C4orf45Q96LM5 186 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 CITED2Q99967 270 aaPredicted RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 COMMD5Q9GZQ3 224 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 SNCGO76070 127 aa5.05□□□□□ -1.6
VCAN-201ENST00000265077 HIST1H1DP16402 221 aaKnown RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 MLF2Q15773 248 aaPredicted RBP5.05□□□□□ -1.6
VCAN-201ENST00000265077 APOBEC3DQ96AK3 386 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms