RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 RIPK1Q13546 671 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 GPR176Q14439 515 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 SLC22A6Q4U2R8 563 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 CXorf66Q5JRM2 361 aaPredicted RBP9.71□□□□□ -0.86
TRAF4-202ENST00000262396 TEX38Q6PEX7 206 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 OR2W3Q7Z3T1 314 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 LINC00596Q86U02 117 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.86
TRAF4-202ENST00000262396 PRR18Q8N4B5 295 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 LINC00482Q8N8I6 264 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 UBALD1Q8TB05 177 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 GNG12Q9UBI6 72 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 KIAA2026Q5HYC2 2103 aa9.71□□□□□ -0.86
TRAF4-202ENST00000262396 IGHV3-43A0A0B4J1X8 118 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 IGHV1-3A0A0C4DH29 117 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 A0A1W2PPI3 338 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 WI2-2373I1.2A0A1W2PRP0 233 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 GEMIN2O14893 280 aaKnown RBP9.7□□□□□ -0.86
TRAF4-202ENST00000262396 IGHV3-43DP0DP04 118 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 VDAC1P21796 283 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 THBS3P49746 956 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 GP2P55259 537 aaKnown RBP9.7□□□□□ -0.86
TRAF4-202ENST00000262396 RBM11P57052 281 aaKnown RBP9.7□□□□□ -0.86
TRAF4-202ENST00000262396 DIAPH2-AS1Q14236 149 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 MPV17LQ2QL34 196 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 CCDC58Q4VC31 144 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 ZNF695Q8IW36 515 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 STPG2Q8N412 459 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 JAGN1Q8N5M9 183 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 SPACA1Q9HBV2 294 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 DSCAML1Q8TD84 2053 aa9.7□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A20PA6NIJ5 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A9PA6NNJ1 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A12PA8MX19 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 NPIPB11E5RHQ5 1161 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 H3BNX3 289 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A13PP0C7W8 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A14PP0C7W9 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 FAM90A24PP0C7X0 464 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 CGB3P0DN86 165 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 CGB7P0DN87 165 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 DCKP27707 260 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 DGCR2P98153 550 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 ZNF816Q0VGE8 651 aaPredicted RBP9.69□□□□□ -0.86
TRAF4-202ENST00000262396 PNLIPRP3Q17RR3 467 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 UTF1Q5T230 341 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 C6orf183Q5T699 404 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 TGIF2LXQ8IUE1 241 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 CYGBQ8WWM9 190 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 TFAP2CQ92754 450 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 EAF1Q96JC9 268 aaPredicted RBP9.69□□□□□ -0.86
TRAF4-202ENST00000262396 ZNF184Q99676 751 aaPredicted RBP9.69□□□□□ -0.86
TRAF4-202ENST00000262396 BABAM2Q9NXR7 383 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 ETAA1Q9NY74 926 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 KCNIP1Q9NZI2 227 aa9.69□□□□□ -0.86
TRAF4-202ENST00000262396 EXOSC1Q9Y3B2 195 aaKnown RBP9.69□□□□□ -0.86
TRAF4-202ENST00000262396 CCL24O00175 119 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 TXNL1O43396 289 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 ORC5O43913 435 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 MOSP00540 346 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 IGHG2P01859 326 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 GABRB1P18505 474 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 GPR12P47775 334 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 ETV1P50549 477 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 KRTAP10-11P60412 298 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 GPR50Q13585 617 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 OR2G6Q5TZ20 316 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 TMEM65Q6PI78 240 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 PQLC1Q8N2U9 271 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 OR10V1Q8NGI7 309 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 OR52M1Q8NGK5 317 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 OR5M8Q8NGP6 311 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 OR8U1Q8NH10 309 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 SLC29A1Q99808 456 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 LINC00574Q9H8X3 128 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 S100A14Q9HCY8 104 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 FGF20Q9NP95 211 aaPredicted RBP9.68□□□□□ -0.86
TRAF4-202ENST00000262396 LIN7CQ9NUP9 197 aaKnown RBP9.68□□□□□ -0.86
TRAF4-202ENST00000262396 GFOD1Q9NXC2 390 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 IL36GQ9NZH8 169 aa9.68□□□□□ -0.86
TRAF4-202ENST00000262396 MRPS28Q9Y2Q9 187 aaKnown RBP9.68□□□□□ -0.86
TRAF4-202ENST00000262396 PNMA8CA0A1B0GUJ8 204 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 LIMS3P0CW19 117 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 LIMS4P0CW20 117 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 CD1BP29016 333 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 SOX6P35712 828 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 SMN1Q16637 294 aaKnown RBP9.67□□□□□ -0.86
TRAF4-202ENST00000262396 NHLRC3Q5JS37 347 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 SYT6Q5T7P8 510 aaPredicted RBP9.67□□□□□ -0.86
TRAF4-202ENST00000262396 AWAT2Q6E213 333 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 TRAT1Q6PIZ9 186 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 GLIPR1L1Q6UWM5 242 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 ASCL4Q6XD76 172 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
TRAF4-202ENST00000262396 C18orf65Q6ZTR6 163 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms