RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ZNF737O75373 536 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 SCGB1D1O95968 90 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 OPN1LWP04000 364 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 TYMSP04818 313 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 LINC00614P0C842 121 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 CLDN17P56750 224 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 RPL23P62829 140 aaKnown RBP9.9□□□□□ -0.83
TROAP-201ENST00000257909 PRDX4Q13162 271 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 RNPS1Q15287 305 aaKnown RBP9.9□□□□□ -0.83
TROAP-201ENST00000257909 SNAI3Q3KNW1 292 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 ZNF818PQ6ZRF7 136 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 FOXL2NBQ6ZUU3 175 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 PRR18Q8N4B5 295 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 RNF138Q8WVD3 245 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 TMEM37Q8WXS4 190 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 PCGF1Q9BSM1 259 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 TMEM208Q9BTX3 173 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 OR51I2Q9H344 312 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 PLEK2Q9NYT0 353 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 TAAR3PQ9P1P4 343 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 FUT9Q9Y231 359 aa9.9□□□□□ -0.83
TROAP-201ENST00000257909 MAP1LC3B2A6NCE7 125 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 TMEM250H0YL14 139 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 SLC25A6P12236 298 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 OR10J1P30954 320 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 SRP14P37108 136 aaKnown RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 MEF2BQ02080 365 aaPredicted RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 SRSF7Q16629 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
TROAP-201ENST00000257909 TMEM41BQ5BJD5 291 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 Q6ZPA2 131 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 ZNF573Q86YE8 665 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 GAPTQ8N292 157 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 OR2T10Q8NGZ9 312 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 NAT6Q93015 286 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 MAP1LC3BQ9GZQ8 125 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 VSIRQ9H7M9 311 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 OR6C3Q9NZP0 311 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 IGLV3-32A0A0A0MS00 114 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 A0A1W2PPQ1 181 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 H0Y980 276 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 SLC33A1O00400 549 aaPredicted RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 NXPH3O95157 252 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 CNOT4O95628 575 aaKnown RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 FKBP2P26885 142 aaKnown RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 OR3A1P47881 315 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 CNN1P51911 297 aaKnown RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 RPP30P78346 268 aaKnown RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 AARDQ4LEZ3 155 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 BTNL3Q6UXE8 466 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 NABP1Q96AH0 204 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 NAGKQ9UJ70 344 aa9.89□□□□□ -0.83
TROAP-201ENST00000257909 POLR3KQ9Y2Y1 108 aaPredicted RBP9.89□□□□□ -0.83
TROAP-201ENST00000257909 C10orf142B7Z368 130 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 CTHP32929 405 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 ARL4DP49703 201 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 CCR5P51681 352 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 LBX1P52954 281 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 RBM11P57052 281 aaKnown RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 HNRNPKP61978 463 aaKnown RBP eCLIP9.88□□□□□ -0.83
TROAP-201ENST00000257909 RPS18P62269 152 aaKnown RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 DLX2Q07687 328 aaPredicted RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 TMEM267Q0VDI3 215 aaPredicted RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 TMEM92Q6UXU6 159 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 THAP3Q8WTV1 239 aaPredicted RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 BTF3L4Q96K17 158 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 IMMP2LQ96T52 175 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 MYO15AQ9UKN7 3530 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 RTTNQ86VV8 2226 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 TCRBV21S2A2A0A5A6 115 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 H3BP45 60 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 SOX15O60248 233 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 NRASP01111 189 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 CA3P07451 260 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 ELLP55199 621 aaPredicted RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 HBG1P69891 147 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 HBG2P69892 147 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 MRPS21P82921 87 aaKnown RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 LRRC75BQ2VPJ9 315 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 KIAA0895LQ68EN5 471 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 ZNF774Q6NX45 483 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 KCNIP4Q6PIL6 250 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 OR1L3Q8NH93 324 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 TMEM54Q969K7 222 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 KLHDC7BQ96G42 594 aa9.88□□□□□ -0.83
TROAP-201ENST00000257909 PARD6GQ9BYG4 376 aaPredicted RBP9.88□□□□□ -0.83
TROAP-201ENST00000257909 IGHV3-20A0A0C4DH32 117 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 A0A1B0GX78 115 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 LRRC3CA6NJW4 275 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 CCDC85CA6NKD9 419 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 S100GP29377 79 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 PSMB3P49720 205 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 FUT6P51993 359 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 GNB2P62879 340 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 LCN2P80188 198 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 TMEM42Q69YG0 159 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 ZNF525Q8N782 197 aa9.87□□□□□ -0.83
TROAP-201ENST00000257909 OR2AE1Q8NHA4 323 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms