RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 Q6ZT83 130 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 STPG2Q8N412 459 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 LIN7CQ9NUP9 197 aaKnown RBP13.43□□□□□ -0.26
RFX1-201ENST00000254325 TOR1AO14656 332 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 LILRA1O75019 489 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 OR2H2O95918 312 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 HAND1O96004 215 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 PMELP40967 661 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 OR3A1P47881 315 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 P2RY1P47900 373 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 MSMO1Q15800 293 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 ZNF818PQ6ZRF7 136 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 ZNF826PQ6ZT77 177 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 C5orf24Q7Z6I8 188 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
RFX1-201ENST00000254325 TMEM218A2RU14 115 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 C3orf80F5H4A9 247 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 IAPPP10997 89 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 PRAMEF6Q5VXH4 476 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 TCTEX1D2Q8WW35 142 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 CXXC4Q9H2H0 198 aa13.43□□□□□ -0.26
RFX1-201ENST00000254325 LAMA1P25391 3075 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 SPINT2O43291 252 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 SMPD2O60906 423 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 NHLH2Q02577 135 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 NSUN5P2Q63ZY6 315 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 BHLHA15Q7RTS1 189 aaPredicted RBP13.42□□□□□ -0.26
RFX1-201ENST00000254325 RFESDQ8TAC1 157 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 RPS10P5Q9NQ39 176 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 FOXI3A8MTJ6 420 aaPredicted RBP13.42□□□□□ -0.26
RFX1-201ENST00000254325 HNF4GQ14541 408 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 KLF14Q8TD94 323 aaPredicted RBP13.42□□□□□ -0.26
RFX1-201ENST00000254325 WNT2BQ93097 391 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 POMT1Q9Y6A1 747 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 A8MXK9 166 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 CLDN1O95832 211 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 ZNF610Q8N9Z0 462 aa13.42□□□□□ -0.26
RFX1-201ENST00000254325 SHANK1Q9Y566 2161 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 RNASEK-C17orf49H0YIS7 233 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 IRF2P14316 349 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 CBR1P16152 277 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 CEBPDP49716 269 aaPredicted RBP13.41□□□□□ -0.26
RFX1-201ENST00000254325 MIDNQ504T8 468 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 OR5C1Q8NGR4 320 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 HS3ST6Q96QI5 342 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 Q6ZSR3 168 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 NTNG2Q96CW9 530 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 RSRP1Q9BUV0 290 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 MKRN2OSH3BPM6 223 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 MRGPRDQ8TDS7 321 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 PLPPR2Q96GM1 343 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 FAM234AQ9H0X4 552 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 ZDHHC11Q9H8X9 412 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 PARD6AQ9NPB6 346 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 CRIM1Q9NZV1 1036 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 FBXO7Q9Y3I1 522 aa13.41□□□□□ -0.26
RFX1-201ENST00000254325 SNRNP70P08621 437 aaKnown RBP13.4□□□□□ -0.26
RFX1-201ENST00000254325 EWSR1Q01844 656 aaKnown RBP eCLIP13.4□□□□□ -0.26
RFX1-201ENST00000254325 GABRA6Q16445 453 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 C9orf106Q8NAJ2 232 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 CACNG5Q9UF02 275 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 PURGQ9UJV8 347 aaKnown RBP13.4□□□□□ -0.26
RFX1-201ENST00000254325 AUP1Q9Y679 476 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 TRBV6-7A0A0A0MS04 114 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 CRYABP02511 175 aaKnown RBP13.4□□□□□ -0.26
RFX1-201ENST00000254325 ZNF154Q13106 437 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 REG4Q9BYZ8 158 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 AHRRA9YTQ3 701 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 CHST1O43916 411 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 SS18L1O75177 396 aaPredicted RBP13.4□□□□□ -0.26
RFX1-201ENST00000254325 PSG2P11465 335 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 F2RP25116 425 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 CXorf66Q5JRM2 361 aaPredicted RBP13.4□□□□□ -0.26
RFX1-201ENST00000254325 SPANXN5Q5MJ07 72 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 ERGIC1Q969X5 290 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 LIME1Q9H400 295 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 PLSCR2Q9NRY7 297 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 OR1A1Q9P1Q5 309 aa13.4□□□□□ -0.26
RFX1-201ENST00000254325 VSTM5A8MXK1 200 aa13.4□□□□□ -0.27
RFX1-201ENST00000254325 SPRY3O43610 288 aa13.4□□□□□ -0.27
RFX1-201ENST00000254325 DFFBO76075 338 aa13.4□□□□□ -0.27
RFX1-201ENST00000254325 TNFSF4P23510 183 aa13.4□□□□□ -0.27
RFX1-201ENST00000254325 PSG7Q13046 419 aa13.4□□□□□ -0.27
RFX1-201ENST00000254325 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.27
RFX1-201ENST00000254325 TMEM210A6NLX4 147 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 CEBPZOSA8MTT3 80 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 RPS2P15880 293 aaKnown RBP13.39□□□□□ -0.27
RFX1-201ENST00000254325 BMP5P22003 454 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 ZNF709Q8N972 641 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 OR51I2Q9H344 312 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 C19orf12Q9NSK7 152 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 UQCC1Q9NVA1 299 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 ACACAQ13085 2346 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 CDK2AP1O14519 115 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 PGLYRP1O75594 196 aaPredicted RBP13.39□□□□□ -0.27
RFX1-201ENST00000254325 KRASP01116 189 aa13.39□□□□□ -0.27
RFX1-201ENST00000254325 GAPDHP04406 335 aaKnown RBP13.39□□□□□ -0.27
RFX1-201ENST00000254325 HBG1P69891 147 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms