RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 HS3ST3B1Q9Y662 390 aa10.25□□□□□ -0.77
SEC61A1-201ENST00000243253 ARFGEF3Q5TH69 2177 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 H3BQ15 152 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 ATXN7O15265 892 aaPredicted RBP10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 IGLV2-14P01704 120 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 RAC1P63000 192 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 CNN3Q15417 329 aaKnown RBP10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 NCMAPQ5T1S8 102 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 TMPRSS7Q7RTY8 843 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 BCO1Q9HAY6 547 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 SLC7A10Q9NS82 523 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 CDRT15L2A8MXV6 281 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 IGHV3-13P01766 116 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 IGHV3-7P01780 117 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 WNT2P09544 360 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 PAX1P15863 534 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 ZNF14P17017 642 aaPredicted RBP10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 ABLIM2Q6H8Q1 611 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 TBC1D26Q86UD7 250 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 CXorf67Q86X51 503 aaPredicted RBP10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 GCNT2Q8N0V5 402 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 C17orf78Q8N4C9 275 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 OR51H1Q8NH63 302 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 THOC3Q96J01 351 aaKnown RBP10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 C1QTNF5Q9BXJ0 243 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 TMPRSS5Q9H3S3 457 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 C5orf49A4QMS7 147 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 UCP1P25874 307 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 CDX1P47902 265 aaPredicted RBP10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 ZXDAP98168 799 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 TSC22D1Q15714 1073 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 ZNF343Q6P1L6 599 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 PCSK4Q6UW60 755 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 OR10G4Q8NGN3 311 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 Q9N2K0 584 aa10.24□□□□□ -0.77
SEC61A1-201ENST00000243253 A0A0G2JRQ6 117 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 K7ESF4 209 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 SCAF4O95104 1147 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 FGF5P12034 268 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 S100PP25815 95 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 FUT6P51993 359 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 CPEB3Q8NE35 698 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM213BQ8TBF2 198 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 CPT1CQ8TCG5 803 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 RBMXL1Q96E39 390 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 OR2H1Q9GZK4 316 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 DEFB127Q9H1M4 99 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 PRDM13Q9H4Q3 707 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 KCNJ16Q9NPI9 418 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 ZNF391Q9UJN7 358 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 COL12A1Q99715 3063 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 TRBV23-1A0A0A0MS06 115 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 TRAV1-1A0A0B4J248 108 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 SLC22A20A6NK97 555 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 H0YL77 283 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 DNPH1O43598 174 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 CST7O76096 145 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 YIF1AO95070 293 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 OR2C1O95371 312 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 HSPB1P04792 205 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 PDZD11Q5EBL8 140 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 IL22RA1Q8N6P7 574 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 PBDC1Q9BVG4 233 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 ZNF286AQ9HBT8 521 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 COLQQ9Y215 455 aaPredicted RBP10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 DMRT1Q9Y5R6 373 aa10.23□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 GPM6AP51674 278 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST2H2BEQ16778 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM185AQ8N0U4 392 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 ZNF565Q8N9K5 539 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BHQ93079 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BNQ99877 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 HIST1H2BMQ99879 126 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 PLEKHF2Q9H8W4 249 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A10PA6NDY2 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A18PA6NE21 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A16PA6NEW6 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A20PA6NIJ5 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A8PA6NJQ4 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A7PA6NKC0 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A22PA8MWA6 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A12PA8MX19 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A5PA8MXJ8 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A23PA8MXZ1 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A15PP0C7V4 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A13PP0C7W8 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A14PP0C7W9 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A24PP0C7X0 464 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 RAC3P60763 192 aa10.22□□□□□ -0.77
SEC61A1-201ENST00000243253 FAM90A2PQ658T7 463 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms