RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 EHFQ9NZC4 300 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 UTS2O95399 124 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 FBXW4P57775 412 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 FAM3BP58499 235 aaPredicted RBP17.16■□□□□ 0.34
HOXC13-201ENST00000243056 TMEM183BQ1AE95 376 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 NUP54Q7Z3B4 507 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 RNF144BQ7Z419 303 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 RBMXL1Q96E39 390 aaKnown RBP17.16■□□□□ 0.34
HOXC13-201ENST00000243056 PGAM5Q96HS1 289 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 TSPAN32Q96QS1 320 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 WDR54Q9H977 334 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 ZNF160Q9HCG1 818 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 GNG13Q9P2W3 67 aa17.16■□□□□ 0.34
HOXC13-201ENST00000243056 C14orf166Q9Y224 244 aaKnown RBP17.16■□□□□ 0.34
HOXC13-201ENST00000243056 LOC101059948A0A1B0GTJ6 334 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 FRG2CA6NGY1 282 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 IFI6P09912 130 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 FOLR3P41439 243 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 CNN1P51911 297 aaKnown RBP17.15■□□□□ 0.34
HOXC13-201ENST00000243056 SRSF6Q13247 344 aaKnown RBP17.15■□□□□ 0.34
HOXC13-201ENST00000243056 ACOT6Q3I5F7 207 aaPredicted RBP17.15■□□□□ 0.34
HOXC13-201ENST00000243056 URB1O60287 2271 aaKnown RBP17.15■□□□□ 0.34
HOXC13-201ENST00000243056 PCSK5Q92824 1860 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 BPNT1O95861 308 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 COX6A1P12074 109 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 ALG10Q5BKT4 473 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 LINC01551Q86U37 167 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 ZNF441Q8N8Z8 693 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 OR52M1Q8NGK5 317 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 RASL10BQ96S79 203 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 LPAR5Q9H1C0 372 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 RNF24Q9Y225 148 aa17.15■□□□□ 0.34
HOXC13-201ENST00000243056 IGHV1-45A0A0A0MS14 117 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 TM4SF5O14894 197 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 CSTAP01040 98 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 IL12BP29460 328 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 RANP62826 216 aaKnown RBP17.14■□□□□ 0.33
HOXC13-201ENST00000243056 TMEM164Q5U3C3 297 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 C1orf140Q5VVS0 124 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 Q6ZWC4 215 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 NUDT11Q96G61 164 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 ST6GALNAC5Q9BVH7 336 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 HHLA2Q9UM44 414 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 MRPS28Q9Y2Q9 187 aaKnown RBP17.14■□□□□ 0.33
HOXC13-201ENST00000243056 ALPK2Q86TB3 2170 aa17.14■□□□□ 0.33
HOXC13-201ENST00000243056 IGKV1D-42A0A075B6H8 117 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 TRAV39A0A0B4J263 110 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 ANKUB1A6NFN9 424 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 IL33O95760 270 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 HIST1H1DP16402 221 aaKnown RBP17.13■□□□□ 0.33
HOXC13-201ENST00000243056 GALR1P47211 349 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 CST9LP1Q5W188 147 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 GRINAQ7Z429 371 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 FBXL14Q8N1E6 418 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 MOB3AQ96BX8 217 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 VAMP8Q9BV40 100 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 TMEM14DPA8MWL7 114 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 CD46P15529 392 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 CDKN1AP38936 164 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 ZNF41P51814 821 aaPredicted RBP17.13■□□□□ 0.33
HOXC13-201ENST00000243056 RUNX1Q01196 453 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 ATP1A1-AS1Q5TC04 95 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 ELL3Q9HB65 397 aaPredicted RBP17.13■□□□□ 0.33
HOXC13-201ENST00000243056 TMEM106BQ9NUM4 274 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 SLC7A11Q9UPY5 501 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 LRP12Q9Y561 859 aa17.13■□□□□ 0.33
HOXC13-201ENST00000243056 SERINC4A6NH21 518 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 DLL1O00548 723 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 LILRA1O75019 489 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 HLA-DQA2P01906 255 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 TMEM50BP56557 158 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 CSNK2A1P68400 391 aaPredicted RBP17.12■□□□□ 0.33
HOXC13-201ENST00000243056 NHLH1Q02575 133 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 ZNF92Q03936 586 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 ADIRFQ15847 76 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.12■□□□□ 0.33
HOXC13-201ENST00000243056 SP6Q3SY56 376 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 PPP1R32Q7Z5V6 425 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 C10orf53Q8N6V4 93 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 CSNK2A3Q8NEV1 391 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 TMEM171Q8WVE6 324 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 BOD1Q96IK1 185 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 HIF3AQ9Y2N7 669 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 EMC9Q9Y3B6 208 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 MED13Q9UHV7 2174 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 FAM24AA6NFZ4 105 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 ZFP92A6NM28 416 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 Q0VFX4 171 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 ZNF141Q15928 474 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 UNQ5815/PRO19632Q6UWF5 114 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 NUDT16L1Q9BRJ7 211 aaKnown RBP17.12■□□□□ 0.33
HOXC13-201ENST00000243056 OR6C3Q9NZP0 311 aa17.12■□□□□ 0.33
HOXC13-201ENST00000243056 NXT1Q9UKK6 140 aaKnown RBP17.12■□□□□ 0.33
HOXC13-201ENST00000243056 CRYM-AS1A6NIL9 109 aa17.11■□□□□ 0.33
HOXC13-201ENST00000243056 DKK1O94907 266 aa17.11■□□□□ 0.33
HOXC13-201ENST00000243056 H2BFMP0C1H6 154 aa17.11■□□□□ 0.33
HOXC13-201ENST00000243056 CSNK1A1P48729 337 aa17.11■□□□□ 0.33
HOXC13-201ENST00000243056 PRDX4Q13162 271 aa17.11■□□□□ 0.33
HOXC13-201ENST00000243056 IL13RA2Q14627 380 aa17.11■□□□□ 0.33
HOXC13-201ENST00000243056 LYZL2Q7Z4W2 148 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms