RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 CAV2P51636 162 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 ZNF133P52736 654 aaPredicted RBP7.34□□□□□ -1.23
VPS4B-201ENST00000238497 IZUMO4Q1ZYL8 232 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 ZNF660Q6AZW8 331 aaPredicted RBP7.34□□□□□ -1.23
VPS4B-201ENST00000238497 DNM1P46Q6ZS02 220 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 OVCH2Q7RTZ1 564 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 SUN5Q8TC36 379 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 NINJ1Q92982 152 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 OCSTAMPQ9BR26 566 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 ALX4Q9H161 411 aaPredicted RBP7.34□□□□□ -1.23
VPS4B-201ENST00000238497 MTCH1Q9NZJ7 389 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 DOCK11Q5JSL3 2073 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 RRASP10301 218 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 CEBPGP53567 150 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 AANATQ16613 207 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 TBC1D28Q2M2D7 210 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 ACOT7LQ6ZUV0 252 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 SLC51BQ86UW2 128 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 OR1S1Q8NH92 325 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 RFESDQ8TAC1 157 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 RBPMSQ93062 196 aaKnown RBP7.34□□□□□ -1.23
VPS4B-201ENST00000238497 NARFLQ9H6Q4 476 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 C12orf4Q9NQ89 552 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 TRAPPC2LQ9UL33 140 aa7.34□□□□□ -1.23
VPS4B-201ENST00000238497 H0YL77 283 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 DEGS1O15121 323 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 TK1P04183 234 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 FPR2P25090 351 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 MPGP29372 298 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 CDKN1AP38936 164 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 WNT5AP41221 380 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 RBM11P57052 281 aaKnown RBP7.34□□□□□ -1.24
VPS4B-201ENST00000238497 HIST1H3AP68431 136 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 ACTBL2Q562R1 376 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 PAN3Q58A45 887 aaKnown RBP7.34□□□□□ -1.24
VPS4B-201ENST00000238497 HIST2H3PS2Q5TEC6 136 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 CRIP3Q6Q6R5 217 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 HIST2H3AQ71DI3 136 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 TGIF2LYQ8IUE0 185 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 TMEM217Q8N7C4 229 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 SLC25A40Q8TBP6 338 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 NANOS1Q8WY41 292 aaKnown RBP7.34□□□□□ -1.24
VPS4B-201ENST00000238497 POM121Q96HA1 1249 aa7.34□□□□□ -1.24
VPS4B-201ENST00000238497 CISD1Q9NZ45 108 aaKnown RBP7.34□□□□□ -1.24
VPS4B-201ENST00000238497 OR5H1A6NKK0 313 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 H3BP45 60 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 TIMM8AO60220 97 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-201ENST00000238497 RBMXL2O75526 392 aaKnown RBP7.33□□□□□ -1.24
VPS4B-201ENST00000238497 CHATP28329 748 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 SUPT4H1P63272 117 aaKnown RBP7.33□□□□□ -1.24
VPS4B-201ENST00000238497 EDDM3AQ14507 147 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 CLINT1Q14677 625 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 TMEM268Q5VZI3 342 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 GGNBP1Q5YKI7 109 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 TMEM108Q6UXF1 575 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 SCARB1Q8WTV0 552 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 HPSE2Q8WWQ2 592 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 RRNAD1Q96FB5 475 aaKnown RBP7.33□□□□□ -1.24
VPS4B-201ENST00000238497 LINC00052Q96N35 136 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 TREM1Q9NP99 234 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 PCDHB16Q9NRJ7 776 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 PPP1R3CQ9UQK1 317 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 SPEF1Q9Y4P9 236 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 ATP23Q9Y6H3 246 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 DPRXA6NFQ7 191 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 H0YIZ8 118 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 CRYZL1O95825 349 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 NMBP08949 121 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 PPP1CBP62140 327 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 ARL6IP1Q15041 203 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 SPNS3Q6ZMD2 512 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 C20orf204Q6ZNR8 217 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 ZNF695Q8IW36 515 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 HSD17B11Q8NBQ5 300 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 Q96MF0 132 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 C1orf123Q9NWV4 160 aa7.33□□□□□ -1.24
VPS4B-201ENST00000238497 ZANQ9Y493 2812 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 A0A0D9SG52 128 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 RPS10-NUDT3A0A1W2PQS6 291 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 ZNF705EA8MWA4 302 aaPredicted RBP7.32□□□□□ -1.24
VPS4B-201ENST00000238497 WRBO00258 174 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 WNT9BO14905 357 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 PRH1P02810 166 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 M6PRP20645 277 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 CLLU1Q5K131 121 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 TIMM23BQ5SRD1 257 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 FAM89BQ8N5H3 189 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 DEFB108BQ8NET1 73 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 OR1K1Q8NGR3 316 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 POM121L2Q96KW2 1035 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 REPIN1Q9BWE0 567 aaKnown RBP7.32□□□□□ -1.24
VPS4B-201ENST00000238497 FAM234AQ9H0X4 552 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 RGCCQ9H4X1 137 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 CCL28Q9NRJ3 127 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 SLC2A9Q9NRM0 540 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 IGKV3D-15A0A087WSY6 115 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 HMSDA8MTL9 139 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 H7C1Q1 480 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 GOSR1O95249 250 aa7.32□□□□□ -1.24
VPS4B-201ENST00000238497 TBPP20226 339 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms