RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 WNK3Q9BYP7 1800 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 SSX8Q7RTT4 187 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 DOLPP1Q86YN1 238 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 OR10G4Q8NGN3 311 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 OR10G9Q8NGN4 311 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 OR10G7Q8NGN6 311 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 NTNG2Q96CW9 530 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 CST4P01036 141 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 CDC34P49427 236 aaPredicted RBP16.03■□□□□ 0.16
CLIP2-201ENST00000223398 CLEC18BQ6UXF7 455 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 ZNF680Q8NEM1 530 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 DTD1Q8TEA8 209 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 SF3B6Q9Y3B4 125 aaKnown RBP16.03■□□□□ 0.16
CLIP2-201ENST00000223398 CACNA1EQ15878 2313 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 RFPL3SP0C7P2 107 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 GZMKP49863 264 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 RHOFQ9HBH0 211 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 KCNE5Q9UJ90 142 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 OR2W1Q9Y3N9 320 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 SYNGR1O43759 233 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 SYNGR2O43760 224 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 ERVFRD-1P60508 538 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 MYPOPQ86VE0 399 aaPredicted RBP16.03■□□□□ 0.16
CLIP2-201ENST00000223398 LINC00052Q96N35 136 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 WDFY2Q96P53 400 aa16.03■□□□□ 0.16
CLIP2-201ENST00000223398 MPC2O95563 127 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 DYNLT3P51808 116 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 UBE2L3P68036 154 aaKnown RBP16.02■□□□□ 0.16
CLIP2-201ENST00000223398 KCNMB1Q16558 191 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 CEACAM21Q3KPI0 293 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 C11orf42Q8N5U0 333 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 RPS4Y2Q8TD47 263 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 CXorf58Q96LI9 332 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 TIMP4Q99727 224 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 SH2D2AQ9NP31 389 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 IGHV3OR16-10A0A075B7F0 116 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 CHST1O43916 411 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 PIMREGQ9BSJ6 248 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 WDR61Q9GZS3 305 aaKnown RBP16.02■□□□□ 0.16
CLIP2-201ENST00000223398 ZDHHC11Q9H8X9 412 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 PARP11Q9NR21 331 aa16.02■□□□□ 0.16
CLIP2-201ENST00000223398 RBM11P57052 281 aaKnown RBP16.02■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF658BQ4V348 819 aaPredicted RBP16.02■□□□□ 0.15
CLIP2-201ENST00000223398 CCDC144NLQ6NUI1 221 aa16.02■□□□□ 0.15
CLIP2-201ENST00000223398 DIRC2Q96SL1 478 aa16.02■□□□□ 0.15
CLIP2-201ENST00000223398 AMELYQ99218 206 aa16.02■□□□□ 0.15
CLIP2-201ENST00000223398 P2RX4Q99571 388 aa16.02■□□□□ 0.15
CLIP2-201ENST00000223398 SMIM10L1P0DMW3 83 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 SMIM10Q96HG1 83 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 CCL19Q99731 98 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 PSG2P11465 335 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 ADRB1P08588 477 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 GAR1Q9NY12 217 aaKnown RBP16.01■□□□□ 0.15
CLIP2-201ENST00000223398 ABCA7Q8IZY2 2146 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 OR8I2Q8N0Y5 310 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 SLC2A9Q9NRM0 540 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 FBXL17Q9UF56 701 aa16.01■□□□□ 0.15
CLIP2-201ENST00000223398 K7N7A8 449 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 GSTZ1O43708 216 aaPredicted RBP16■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF883P0CG24 379 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 NQO2P16083 231 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF154Q13106 437 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 ASB13Q8WXK3 278 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF716A6NP11 495 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 EAF1Q96JC9 268 aaPredicted RBP16■□□□□ 0.15
CLIP2-201ENST00000223398 IL13RA2Q14627 380 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 LPAR3Q9UBY5 353 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 TMEM88Q6PEY1 159 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF429Q86V71 674 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 KCNK17Q96T54 332 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 SFXN3Q9BWM7 321 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 PCDHGA9Q9Y5G4 932 aaKnown RBP16■□□□□ 0.15
CLIP2-201ENST00000223398 ARL2-SNX15V9GYD0 113 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 GNG4P50150 75 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 LY6EQ16553 131 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 SLC25A47Q6Q0C1 308 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 OR4A4PQ8NGN8 299 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF596Q8TC21 504 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 Q8WTZ3 238 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 PGLYRP3Q96LB9 341 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 SIRT7Q9NRC8 400 aa16■□□□□ 0.15
CLIP2-201ENST00000223398 TRIM77I1YAP6 450 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 DUSP18Q8NEJ0 188 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 MRPL24Q96A35 216 aaKnown RBP15.99■□□□□ 0.15
CLIP2-201ENST00000223398 ABHD14BQ96IU4 210 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 GFRA1P56159 465 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 GUK1Q16774 197 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 SNAI3Q3KNW1 292 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 PRNDQ9UKY0 176 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 A0A1W2PP11 408 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 TFPI2P48307 235 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 ST6GALNAC2Q9UJ37 374 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 PLXNA1Q9UIW2 1896 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF737O75373 536 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 B3GALNT1O75752 331 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 TPPP2P59282 170 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 ARF6P62330 175 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 PDPNQ86YL7 162 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 SIGLECL1Q8N7X8 197 aa15.99■□□□□ 0.15
CLIP2-201ENST00000223398 SIRT4Q9Y6E7 314 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms