RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 LYZL2Q7Z4W2 148 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 MDP1Q86V88 176 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 C12orf57Q99622 126 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 ANGPTL4Q9BY76 406 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 OR2W1Q9Y3N9 320 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 POMT1Q9Y6A1 747 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 CACNA1HO95180 2353 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 A0A0U1RQV5 110 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 PHOX2AO14813 284 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 FGF5P12034 268 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 HLA-GP17693 338 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 DYNLT3P51808 116 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 HOGA1Q86XE5 327 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 TMEM251Q8N6I4 163 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 DNASE2BQ8WZ79 361 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 HSD17B10Q99714 261 aaKnown RBP10.04□□□□□ -0.8
NOD1-201ENST00000222823 ALX4Q9H161 411 aaPredicted RBP10.04□□□□□ -0.8
NOD1-201ENST00000222823 HS3ST3B1Q9Y662 390 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 FAM157AC9JC47 383 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 EFNB1P98172 346 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 PSG4Q00888 419 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 LGALSLQ3ZCW2 172 aaPredicted RBP10.04□□□□□ -0.8
NOD1-201ENST00000222823 GHITMQ9H3K2 345 aa10.04□□□□□ -0.8
NOD1-201ENST00000222823 COL4A4P53420 1690 aaPredicted RBP10.03□□□□□ -0.8
NOD1-201ENST00000222823 SHISA3A0PJX4 238 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 LRRC3CA6NJW4 275 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 ANKRD34CP0C6C1 535 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 DTD1Q8TEA8 209 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 SH2D2AQ9NP31 389 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 A0A1W2PRD5 423 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 A0A1W2PRF3 423 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 A0A1W2PRM7 423 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 OR5H1A6NKK0 313 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 E9PQ18 207 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 SLC25A5P05141 298 aaKnown RBP10.03□□□□□ -0.8
NOD1-201ENST00000222823 CTSBP07858 339 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 FCER1GP30273 86 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 FGF8P55075 233 aaPredicted RBP10.03□□□□□ -0.8
NOD1-201ENST00000222823 HLA-DRB3P79483 266 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 MRGPRFQ96AM1 343 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 HDHD3Q9BSH5 251 aaPredicted RBP10.03□□□□□ -0.8
NOD1-201ENST00000222823 CDRT15L2A8MXV6 281 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 C16orf97H3BN30 126 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 STARD6P59095 220 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 ADAD2Q8NCV1 583 aaKnown RBP10.03□□□□□ -0.8
NOD1-201ENST00000222823 SAP25Q8TEE9 199 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 DOK5Q9P104 306 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 KCNK7Q9Y2U2 307 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 AMMECR1Q9Y4X0 333 aaPredicted RBP10.03□□□□□ -0.8
NOD1-201ENST00000222823 A0A1W2PP11 408 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 B3GALNT1O75752 331 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 DYRK2Q92630 601 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 ADIPOR1Q96A54 375 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 TMPRSS5Q9H3S3 457 aa10.03□□□□□ -0.8
NOD1-201ENST00000222823 NKX2-6A6NCS4 301 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 RBFOX3A6NFN3 312 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 RPL36A-HNRNPH2H7BZ11 118 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 FABP4P15090 132 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 FSTP19883 344 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 KRTDAPP60985 99 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 SIGIRRQ6IA17 410 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 OR4A4PQ8NGN8 299 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 Q9N2K0 584 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 LPAR3Q9UBY5 353 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 NAT8BQ9UHF3 227 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.8
NOD1-201ENST00000222823 IGLV1-36A0A0B4J1U3 117 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 RD3LP0DJH9 198 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 ORM2P19652 201 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 DHRS7BQ6IAN0 325 aaPredicted RBP10.02□□□□□ -0.81
NOD1-201ENST00000222823 RNF122Q9H9V4 155 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 SCN2AQ99250 2005 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 IGHV1-45A0A0A0MS14 117 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 TMEM218A2RU14 115 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 SPINK4O60575 86 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 LINC00271P0C7V0 271 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 RAB5AP20339 215 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 GNG4P50150 75 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 GAS1P54826 345 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 ZNF154Q13106 437 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 TNXAQ16473 311 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 TGIF2LYQ8IUE0 185 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 TGIF2LXQ8IUE1 241 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 VOPP1Q96AW1 172 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 TOLLIPQ9H0E2 274 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 ZNF665Q9H7R5 613 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 CA10Q9NS85 328 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 LIPGQ9Y5X9 500 aa10.02□□□□□ -0.81
NOD1-201ENST00000222823 TRBV5-5A0A0J9YX44 114 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 A0A1W2PQM1 296 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 RBM11P57052 281 aaKnown RBP10.01□□□□□ -0.81
NOD1-201ENST00000222823 FAM214BQ7L5A3 538 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 OR4D10Q8NGI6 311 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 ZNF488Q96MN9 340 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 ATP5SQ99766 215 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 GDF15Q99988 308 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms