RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 TCF15Q12870 199 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 AKIRIN2Q53H80 203 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 TBC1D26Q86UD7 250 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 MDP1Q86V88 176 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 ABHD14BQ96IU4 210 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 PBDC1Q9BVG4 233 aa18.93■□□□□ 0.62
CCDC9-201ENST00000221922 CTXN2P0C2S0 81 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 MEOX2P50222 304 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 P4HA3Q7Z4N8 544 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 SELENOHQ8IZQ5 122 aaKnown RBP18.92■□□□□ 0.62
CCDC9-201ENST00000221922 NEK7Q8TDX7 302 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 SPIN2AQ99865 258 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 SPIN2BQ9BPZ2 258 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 PKIBQ9C010 78 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 SLC35B3Q9H1N7 401 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 CLCF1Q9UBD9 225 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 UBE2J1Q9Y385 318 aaPredicted RBP18.92■□□□□ 0.62
CCDC9-201ENST00000221922 DOCK7Q96N67 2140 aa18.92■□□□□ 0.62
CCDC9-201ENST00000221922 EP300Q09472 2414 aaPredicted RBP18.92■□□□□ 0.62
CCDC9-201ENST00000221922 C1orf196B1AJZ1 125 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 NKX2-1P43699 371 aaPredicted RBP18.91■□□□□ 0.62
CCDC9-201ENST00000221922 ZNF266Q14584 549 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 TBC1D28Q2M2D7 210 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 SMDT1Q9H4I9 107 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 MED12LQ86YW9 2145 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 TRAV17A0A0B4J275 112 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 IGSF23A1L1A6 192 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 CLEC18AA5D8T8 446 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 SYNGR1O43759 233 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 PITX3O75364 302 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 SNRNP70P08621 437 aaKnown RBP18.91■□□□□ 0.62
CCDC9-201ENST00000221922 ZNF44P15621 663 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 IL24Q13007 206 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 TMEM182Q6ZP80 229 aaPredicted RBP18.91■□□□□ 0.62
CCDC9-201ENST00000221922 ZNF695Q8IW36 515 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 CLEC18CQ8NCF0 446 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 SNIP1Q8TAD8 396 aaKnown RBP18.91■□□□□ 0.62
CCDC9-201ENST00000221922 HS3ST6Q96QI5 342 aa18.91■□□□□ 0.62
CCDC9-201ENST00000221922 DUXBA0A1W2PPF3 345 aa18.9■□□□□ 0.62
CCDC9-201ENST00000221922 FAM24AA6NFZ4 105 aa18.9■□□□□ 0.62
CCDC9-201ENST00000221922 UMAD1C9J7I0 102 aa18.9■□□□□ 0.62
CCDC9-201ENST00000221922 AGAP20933 346 aa18.9■□□□□ 0.62
CCDC9-201ENST00000221922 ZNF565Q8N9K5 539 aa18.9■□□□□ 0.62
CCDC9-201ENST00000221922 PLEKHF2Q9H8W4 249 aa18.9■□□□□ 0.62
CCDC9-201ENST00000221922 LYRM2Q9NU23 88 aaPredicted RBP18.9■□□□□ 0.62
CCDC9-201ENST00000221922 ATP23Q9Y6H3 246 aa18.9■□□□□ 0.62
CCDC9-201ENST00000221922 TUSC2O75896 110 aa18.89■□□□□ 0.62
CCDC9-201ENST00000221922 TGFBR3Q03167 851 aa18.89■□□□□ 0.62
CCDC9-201ENST00000221922 MRPL49Q13405 166 aaKnown RBP18.89■□□□□ 0.62
CCDC9-201ENST00000221922 RHEBQ15382 184 aa18.89■□□□□ 0.62
CCDC9-201ENST00000221922 ZNF818PQ6ZRF7 136 aa18.89■□□□□ 0.62
CCDC9-201ENST00000221922 FAM213BQ8TBF2 198 aa18.89■□□□□ 0.62
CCDC9-201ENST00000221922 IL36RNQ9UBH0 155 aa18.89■□□□□ 0.62
CCDC9-201ENST00000221922 M0R036 132 aa18.89■□□□□ 0.61
CCDC9-201ENST00000221922 PPP1CCP36873 323 aaKnown RBP18.89■□□□□ 0.61
CCDC9-201ENST00000221922 ASCL1P50553 236 aa18.89■□□□□ 0.61
CCDC9-201ENST00000221922 POLR2GP62487 172 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC9-201ENST00000221922 HERPUD1Q15011 391 aa18.89■□□□□ 0.61
CCDC9-201ENST00000221922 ZNF561Q8N587 486 aa18.89■□□□□ 0.61
CCDC9-201ENST00000221922 LILRB1Q8NHL6 650 aaPredicted RBP18.89■□□□□ 0.61
CCDC9-201ENST00000221922 SLC25A31Q9H0C2 315 aa18.89■□□□□ 0.61
CCDC9-201ENST00000221922 KCNJ16Q9NPI9 418 aa18.89■□□□□ 0.61
CCDC9-201ENST00000221922 TRBV6-6A0A0A6YYG2 114 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 C5orf52A6NGY3 159 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 SLC34A2O95436 690 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 SCTP09683 121 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 SNRPEP62304 92 aaKnown RBP18.88■□□□□ 0.61
CCDC9-201ENST00000221922 NMSQ5H8A3 153 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 SPIN3Q5JUX0 258 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 OR2T2Q6IF00 324 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 FAM58AQ8N1B3 248 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 GAPTQ8N292 157 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 SUMF2Q8NBJ7 301 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 OR8G5Q8NG78 346 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 OR1J1Q8NGS3 322 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 OR51B6Q9H340 312 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 FBXO7Q9Y3I1 522 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 AQP7O14520 342 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 EIF3GO75821 320 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC9-201ENST00000221922 HOXB1P14653 301 aaPredicted RBP18.88■□□□□ 0.61
CCDC9-201ENST00000221922 UCP1P25874 307 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 ATP6V0CP27449 155 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 S100A12P80511 92 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 TMEM252Q8N6L7 170 aa18.88■□□□□ 0.61
CCDC9-201ENST00000221922 ESPL1Q14674 2120 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 PROB1E7EW31 1015 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 J3QT63 122 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 LILRA1O75019 489 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 MMP9P14780 707 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 UBE2NP61088 152 aaKnown RBP18.87■□□□□ 0.61
CCDC9-201ENST00000221922 ID3Q02535 119 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 CLINT1Q14677 625 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 C5orf24Q7Z6I8 188 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 PRSS33Q8NF86 280 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 TMEM171Q8WVE6 324 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 RTL8AQ9BWD3 113 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 COL25A1Q9BXS0 654 aaPredicted RBP18.87■□□□□ 0.61
CCDC9-201ENST00000221922 OR51I2Q9H344 312 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 IFT22Q9H7X7 185 aa18.87■□□□□ 0.61
CCDC9-201ENST00000221922 FAM186AA6NE01 2351 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms