RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 CLDN20P56880 219 aa9.23□□□□□ -0.93
TRPS1-201ENST00000220888 U3KQ87 197 aa9.23□□□□□ -0.93
TRPS1-201ENST00000220888 IGHV3-72A0A0B4J1Y9 119 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 PPIAL4CA0A0B4J2A2 164 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 A0A1B0GTL3 188 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 ZNF735P0CB33 412 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 PPIAL4GP0DN37 164 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 PSG6Q00889 435 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 MIDNQ504T8 468 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 TMEM56-RWDD3S4R434 201 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 MYH7BA7E2Y1 1941 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 A0A1B0GU03 582 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 CEACAM1P13688 526 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 RPS4XP62701 263 aaKnown RBP9.22□□□□□ -0.93
TRPS1-201ENST00000220888 GCSAMQ8N6F7 178 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 CTAG2O75638 210 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 FGF5P12034 268 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 GUK1Q16774 197 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 C9orf40Q8IXQ3 194 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 C2CD4CQ8TF44 421 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 VAMP8Q9BV40 100 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 M0R3E3 92 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 PLPP2O43688 288 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 CTSDP07339 412 aaPredicted RBP9.22□□□□□ -0.93
TRPS1-201ENST00000220888 ARF6P62330 175 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 MYOZ3Q8TDC0 251 aa9.22□□□□□ -0.93
TRPS1-201ENST00000220888 TMSB15BA0A087X1C1 80 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 A0A1W2PNV4 684 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 HYPMO75409 117 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 DEDDO75618 318 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 ATP5G2Q06055 141 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 KHDC3LQ587J8 217 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 MESTQ5EB52 335 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 ZNF66Q6ZN08 573 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 SPNS2Q8IVW8 549 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 GAPTQ8N292 157 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 ANGPTL6Q8NI99 470 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 SAP25Q8TEE9 199 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 VPS25Q9BRG1 176 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 IGHV3OR16-10A0A075B7F0 116 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 TRAV39A0A0B4J263 110 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 PPP1R1AQ13522 171 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 KLF9Q13886 244 aaPredicted RBP9.21□□□□□ -0.93
TRPS1-201ENST00000220888 ZBTB44Q8NCP5 570 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 TMEM37Q8WXS4 190 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 Q9N2K0 584 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 CCL28Q9NRJ3 127 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 OR2W1Q9Y3N9 320 aa9.21□□□□□ -0.93
TRPS1-201ENST00000220888 A0A0J9YW62 118 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 KCNAB3O43448 404 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 GCGP01275 180 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 TSPOP30536 169 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRPS1-201ENST00000220888 RAB32Q13637 225 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 IL19Q9UHD0 177 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 POLR2GP62487 172 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRPS1-201ENST00000220888 LINC01560Q8TB33 94 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 SMIM12Q96EX1 92 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 POM121Q96HA1 1249 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 MANBALQ9NQG1 85 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 NRXN3Q9Y4C0 1643 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 RGS13O14921 159 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 NDUFB6O95139 128 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 INHBBP09529 407 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 HOXB1P14653 301 aaPredicted RBP9.21□□□□□ -0.94
TRPS1-201ENST00000220888 NUTF2P61970 127 aaKnown RBP9.21□□□□□ -0.94
TRPS1-201ENST00000220888 C17orf47Q8NEP4 570 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 RPS4Y2Q8TD47 263 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 C10orf90Q96M02 699 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 ZNF385AQ96PM9 386 aaKnown RBP9.21□□□□□ -0.94
TRPS1-201ENST00000220888 SCNM1Q9BWG6 230 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 NIT2Q9NQR4 276 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 SIRT7Q9NRC8 400 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 ELOVL5Q9NYP7 299 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 TTC3P53804 2025 aa9.21□□□□□ -0.94
TRPS1-201ENST00000220888 CORTO00230 105 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 FGF8P55075 233 aaPredicted RBP9.2□□□□□ -0.94
TRPS1-201ENST00000220888 TEPPQ6URK8 271 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 GLDNQ6ZMI3 551 aaPredicted RBP9.2□□□□□ -0.94
TRPS1-201ENST00000220888 MMD2Q8IY49 270 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 CCL27Q9Y4X3 112 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 RGPD2P0DJD1 1756 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 IGKV3D-11A0A0A0MRZ8 115 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 DHRS7CA6NNS2 312 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 B9A039 149 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 SYNGR3O43761 229 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 CIDEAO60543 219 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 ZNF324O75467 553 aaPredicted RBP9.2□□□□□ -0.94
TRPS1-201ENST00000220888 IGKV3-11P04433 115 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 FAM157CP0CG43 387 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 MAS1LP35410 378 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 SLC25A53Q5H9E4 307 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 ZNF841Q6ZN19 808 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 OR10AC1Q8NH08 325 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 GSX1Q9H4S2 264 aaPredicted RBP9.2□□□□□ -0.94
TRPS1-201ENST00000220888 C9orf170A2RU37 121 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 CLDN34H7C241 214 aa9.2□□□□□ -0.94
TRPS1-201ENST00000220888 HRKO00198 91 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms