RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TRGV8A0A0C4DH27 118 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 TMEM30CPA0ZSE6 113 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 CXorf1O96002 111 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 VSIG8P0DPA2 414 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 CTLA4P16410 223 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 DUSP2Q05923 314 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 FZD5Q13467 585 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 FNDC7Q5VTL7 733 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 CD200R1LQ6Q8B3 271 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 OR8I2Q8N0Y5 310 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 TMEM230Q96A57 120 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 FER1L6Q2WGJ9 1857 aa9.18□□□□□ -0.94
VCL-201ENST00000211998 MYH14Q7Z406 1995 aaKnown RBP9.17□□□□□ -0.94
VCL-201ENST00000211998 DANCRP0C864 163 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 HYAL1Q12794 435 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 MYBPHQ13203 477 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 ZNF506Q5JVG8 444 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 OR2T6Q8NHC8 308 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 ASB5Q8WWX0 329 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 ZNF430Q9H8G1 570 aaPredicted RBP9.17□□□□□ -0.94
VCL-201ENST00000211998 GPR27Q9NS67 375 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 NKX2-2O95096 273 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 PPYP01298 95 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 CD74P04233 296 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 S100A4P26447 101 aaKnown RBP9.17□□□□□ -0.94
VCL-201ENST00000211998 FHITP49789 147 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 C5orf17Q8NAS9 161 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 MIEN1Q9BRT3 115 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 ZNF391Q9UJN7 358 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 FAM157BP0CG42 384 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 FOLR2P14207 255 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 AGAP20933 346 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 EPHA8P29322 1005 aaPredicted RBP9.17□□□□□ -0.94
VCL-201ENST00000211998 OPRK1P41145 380 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 RIPPLY3P57055 190 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 SERF2P84101 59 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 Q8IYB0 196 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 OR4C3Q8NH37 302 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 OR1F12Q8NHA8 337 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 P2RX4Q99571 388 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 SH3BGRL3Q9H299 93 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 TUBD1Q9UJT1 453 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 IGLV3-16A0A075B6K0 115 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 IGSF23A1L1A6 192 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 NPBWR2P48146 333 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 HOGA1Q86XE5 327 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 OR1K1Q8NGR3 316 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 OR5R1Q8NH85 324 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 C14orf144Q96I85 54 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 MOGAT1Q96PD6 335 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 SAP30LQ9HAJ7 183 aa9.17□□□□□ -0.94
VCL-201ENST00000211998 DEFB108AA8MXU0 73 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 C1QCP02747 245 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 RELBQ01201 579 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 RNPS1Q15287 305 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 ZCCHC14Q8WYQ9 949 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 SLC25A38Q96DW6 304 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 OR2V2Q96R30 315 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 MRPL13Q9BYD1 178 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 CCL28Q9NRJ3 127 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 CLEC1BQ9P126 229 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 CNTRLQ7Z7A1 2325 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 A6NNC1 897 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 TNFRSF1AP19438 455 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 COL8A1P27658 744 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 EMP1P54849 157 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 NANOS3P60323 173 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 HERVK_113P61574 105 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 TMEM136Q6ZRR5 245 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 ERASQ7Z444 233 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 PDPNQ86YL7 162 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 GMPPAQ96IJ6 420 aaPredicted RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 FOXB1Q99853 325 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 DERL1Q9BUN8 251 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 OCIAD1Q9NX40 245 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 CISD1Q9NZ45 108 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 TINAGQ9UJW2 476 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 ZFC3H1O60293 1989 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 OR2T8A6NH00 312 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 NPIPB8E9PQR5 432 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 NPIPB7O75200 414 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 GNB2P62879 340 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 IGFBP7Q16270 282 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 KHDC1LQ5JSQ8 128 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 TMEM252Q8N6L7 170 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 DEFB108BQ8NET1 73 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 OR4F17Q8NGA8 305 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 MRPS18BQ9Y676 258 aaKnown RBP9.16□□□□□ -0.94
VCL-201ENST00000211998 TRGV5A0A0B4J1U4 118 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 DPRXA6NFQ7 191 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 GNG7O60262 68 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 NGFP01138 241 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 GFRALQ6UXV0 394 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 OR2M3Q8NG83 312 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 NUDT11Q96G61 164 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 HES7Q9BYE0 225 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 SLC52A3Q9NQ40 469 aa9.16□□□□□ -0.94
VCL-201ENST00000211998 COA4Q9NYJ1 87 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms