RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 RPRMQ9NS64 109 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 RNF115Q9Y4L5 304 aa12.01□□□□□ -0.49
USH1C-201ENST00000005226 ZNF729A6NN14 1252 aaPredicted RBP12□□□□□ -0.49
USH1C-201ENST00000005226 HSPB1P04792 205 aaKnown RBP12□□□□□ -0.49
USH1C-201ENST00000005226 PSG2P11465 335 aa12□□□□□ -0.49
USH1C-201ENST00000005226 FABP4P15090 132 aa12□□□□□ -0.49
USH1C-201ENST00000005226 CD200P41217 278 aa12□□□□□ -0.49
USH1C-201ENST00000005226 SRPXP78539 464 aa12□□□□□ -0.49
USH1C-201ENST00000005226 HLA-DRB3P79483 266 aa12□□□□□ -0.49
USH1C-201ENST00000005226 ARL16Q0P5N6 197 aa12□□□□□ -0.49
USH1C-201ENST00000005226 PRDX4Q13162 271 aa12□□□□□ -0.49
USH1C-201ENST00000005226 KRTAP27-1Q3LI81 207 aa12□□□□□ -0.49
USH1C-201ENST00000005226 UNQ6494/PRO21346Q6UXR6 183 aa12□□□□□ -0.49
USH1C-201ENST00000005226 GNPNAT1Q96EK6 184 aaPredicted RBP12□□□□□ -0.49
USH1C-201ENST00000005226 OR51B6Q9H340 312 aa12□□□□□ -0.49
USH1C-201ENST00000005226 UNKLQ9H9P5 680 aaKnown RBP12□□□□□ -0.49
USH1C-201ENST00000005226 FAM86C1Q9NVL1 165 aa12□□□□□ -0.49
USH1C-201ENST00000005226 LOC102723996A0A087X1L8 192 aa12□□□□□ -0.49
USH1C-201ENST00000005226 ARGFXA6NJG6 315 aa12□□□□□ -0.49
USH1C-201ENST00000005226 MMP9P14780 707 aa12□□□□□ -0.49
USH1C-201ENST00000005226 UCP1P25874 307 aa12□□□□□ -0.49
USH1C-201ENST00000005226 EPHA8P29322 1005 aaPredicted RBP12□□□□□ -0.49
USH1C-201ENST00000005226 TAS2R30P59541 319 aa12□□□□□ -0.49
USH1C-201ENST00000005226 SRYQ05066 204 aa12□□□□□ -0.49
USH1C-201ENST00000005226 HLA-BQ31612 363 aa12□□□□□ -0.49
USH1C-201ENST00000005226 PRR18Q8N4B5 295 aa12□□□□□ -0.49
USH1C-201ENST00000005226 IL1F10Q8WWZ1 152 aa12□□□□□ -0.49
USH1C-201ENST00000005226 ATP5SQ99766 215 aa12□□□□□ -0.49
USH1C-201ENST00000005226 SMDT1Q9H4I9 107 aa12□□□□□ -0.49
USH1C-201ENST00000005226 SH2D2AQ9NP31 389 aa12□□□□□ -0.49
USH1C-201ENST00000005226 CHD3Q12873 2000 aaKnown RBP12□□□□□ -0.49
USH1C-201ENST00000005226 NAPSAO96009 420 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 METTL15P1P0C7V9 234 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 PGA5P0DJD9 388 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 TLE4Q04727 773 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 GAMTQ14353 236 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 FAM185AQ8N0U4 392 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 PHF7Q9BWX1 381 aaPredicted RBP11.99□□□□□ -0.49
USH1C-201ENST00000005226 PRRG4Q9BZD6 226 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 ESPL1Q14674 2120 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 KIAA1549Q9HCM3 1950 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 BTBD17A6NE02 478 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 HMGB3O15347 200 aaKnown RBP11.99□□□□□ -0.49
USH1C-201ENST00000005226 NGFP01138 241 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 MMP7P09237 267 aaPredicted RBP11.99□□□□□ -0.49
USH1C-201ENST00000005226 NKX6-1P78426 367 aaPredicted RBP11.99□□□□□ -0.49
USH1C-201ENST00000005226 ZNF726P1Q15940 193 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 CLEC12BQ2HXU8 276 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 TRIM61Q5EBN2 209 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 FAM90A2PQ658T7 463 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 BEND4Q6ZU67 534 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 HIST3H2BBQ8N257 126 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 OR1K1Q8NGR3 316 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
USH1C-201ENST00000005226 FAM210BQ96KR6 192 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 SF3B5Q9BWJ5 86 aaKnown RBP11.99□□□□□ -0.49
USH1C-201ENST00000005226 PRDM13Q9H4Q3 707 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 TREM2Q9NZC2 230 aa11.99□□□□□ -0.49
USH1C-201ENST00000005226 ERRFI1Q9UJM3 462 aaPredicted RBP11.99□□□□□ -0.49
USH1C-201ENST00000005226 A0A087WWC5 75 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 C5orf49A4QMS7 147 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 ZNF503-AS2A6NEH8 195 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 PPP1R2P9O14990 202 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 LILRA1O75019 489 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 MLF1P58340 268 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 S100PBPQ96BU1 408 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 A0A1W2PR80 420 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 PINLYPA6NC86 204 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 CD55P08174 381 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 ZNF16P17020 682 aaPredicted RBP11.98□□□□□ -0.49
USH1C-201ENST00000005226 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
USH1C-201ENST00000005226 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 AGBL5Q8NDL9 886 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 DEPPQ9NTK1 212 aa11.98□□□□□ -0.49
USH1C-201ENST00000005226 IGHV3-64DA0A0J9YX35 117 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 TUSC2O75896 110 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 ELLP55199 621 aaPredicted RBP11.97□□□□□ -0.49
USH1C-201ENST00000005226 DEFA6Q01524 100 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 KIAA2026Q5HYC2 2103 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 ZNF787Q6DD87 383 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 SAP25Q8TEE9 199 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 SNX22Q96L94 193 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 ZNF552Q9H707 407 aaPredicted RBP11.97□□□□□ -0.49
USH1C-201ENST00000005226 OR1A1Q9P1Q5 309 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 PPP1R3CQ9UQK1 317 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 SEC14L6B5MCN3 397 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 IFNA5P01569 189 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 P04436 131 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 F2RP25116 425 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 ZFP36L1Q07352 338 aaKnown RBP11.97□□□□□ -0.49
USH1C-201ENST00000005226 IL24Q13007 206 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 STX12Q86Y82 276 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 NECAP1Q8NC96 275 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 C1QTNF5Q9BXJ0 243 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 PRDM6Q9NQX0 595 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
USH1C-201ENST00000005226 GJE1A6NN92 205 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 KIAA1324LA8MWY0 1029 aaPredicted RBP11.96□□□□□ -0.49
USH1C-201ENST00000005226 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms