RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Arid1bE9Q4N7 2244 aa7.79□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cep290Q6A078 2472 aa7.79□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Zscan4eA0A1B0GRE8 505 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gm45800A0A1B0GT24 152 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr59B1ARL3 323 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vmn2r63E9Q0K5 859 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Zscan4bE9Q3G0 505 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vmn2r102L7N279 857 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 TdgP56581 421 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Scarf2P59222 833 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr616Q3KPB0 317 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tmem18Q3TUD9 140 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 IspdQ5RJG7 447 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Ceacam10Q61400 265 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 PdgfrlQ6PE55 375 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr699Q7TRN3 316 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr285Q7TS17 319 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Kctd7Q8BJK1 289 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Mrgprx1Q8CIP3 322 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 BfarQ8R079 450 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 KptnQ8VCX6 430 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr622Q8VGY7 317 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rnf186Q9D241 226 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Prl2c5Q9JLV9 222 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Piezo2Q8CD54 2822 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Ighv1-31A0A0A6YWK5 117 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cd70O55237 195 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Bpifa2P07743 235 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 MdfiP70331 251 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Dlx6P70397 175 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Q0VG62 139 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Clec12bQ149M0 275 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tmem184aQ3UFJ6 425 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Alg10bQ3UGP8 474 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Gpr55Q3UJF0 327 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Znf583Q3V080 568 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Trp53rkaQ5U452 244 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr93Q6UAH1 312 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 AI987944Q7TPX5 406 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr775Q7TRI4 312 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr91Q7TRL3 312 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr538Q7TRT5 310 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Pdlim5Q8CI51 591 aaKnown RBP7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tmem234Q8R1E7 140 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vmn1r231Q8R2A3 311 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Vmn1r179Q8R2B4 323 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Rbpms2Q8VC52 206 aaKnown RBP7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Tmem54Q9D7S1 219 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Morn5Q9DAI9 170 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Olfr703Q9EPF5 319 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 GrinaQ9ESF4 345 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Kcnmb4Q9JIN6 210 aa7.78□□□□□ -1.16
Upf3b-201ENSMUST00000076265 Cntnap5aQ0V8T9 1304 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr1248A0A1L1SSZ5 307 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Tmem262D3Z338 116 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm1330D3Z460 184 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Vmn2r14E9Q759 848 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr1406E9Q8X1 310 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 D430019H16RikJ3QPM6 83 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Sap18O55128 153 aaKnown RBP7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Lgals3P16110 264 aaKnown RBP7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Il11ra2P70225 432 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cks1brtQ3UNC9 96 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Orm1Q60590 207 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ei24Q61070 340 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Zp1Q62005 623 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Znf250Q7TNU6 535 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr1252Q7TQZ2 314 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 H2-M10.6Q85ZW5 330 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Flrt3Q8BGT1 649 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Swi5Q8K3D3 89 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Tspan10Q8VCF5 331 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ptgr2Q8VDQ1 351 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr1250Q8VGM3 314 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr1233Q8VGN0 305 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Sectm1aQ921W8 192 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ubqln4Q99NB8 596 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Them5Q9CQJ0 248 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Snx10Q9CWT3 201 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Tomm40Q9QYA2 361 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 HraslsQ9QZU4 167 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Hs3st4D3YVV6 449 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm10337F7DEP7 55 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Dbx2F8VQH7 377 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Casp16-psI6L890 176 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Gm10097J3KMK7 105 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 F2rl2O08675 369 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Tpst1O70281 370 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 PpicP30412 212 aaKnown RBP7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Hsf1P38532 525 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Slc1a5P51912 553 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cox7a1P56392 80 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr733Q14AK5 308 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Q3U1D9 316 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Ndrg1Q62433 394 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Cnih3Q6ZWS4 160 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Olfr1128Q7TR47 311 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Zfp62Q8C827 914 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Adhfe1Q8R0N6 465 aa7.77□□□□□ -1.17
Upf3b-201ENSMUST00000076265 Sar1bQ9CQC9 198 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms