RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 NmsQ5H8A1 153 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Trav5d-4Q5R1F6 114 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Bloc1s3Q5U5M8 195 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 UmodQ91X17 642 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tstd3Q9D0B5 157 aa10.5□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm21721J3QMK7 227 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gabrb1P50571 474 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Crybb2P62696 205 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Htr2bQ02152 479 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mfsd2bQ3T9M1 494 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 CfiQ61129 603 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tff3Q62395 81 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ceacam14Q78Y72 263 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Igsf21Q7TNR6 468 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Adprhl1Q8BGK2 353 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mfsd4b1Q8VCV9 425 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 MetrnlQ8VE43 311 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr494Q8VG07 314 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr472Q8VG43 310 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 MrgprgQ91ZB5 289 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr548-ps1A0A1B0GSG0 314 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Cox5aP12787 146 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 BlkP16277 499 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 SnrpnP63163 240 aaKnown RBP10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lcn4Q62472 185 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr980Q8VH08 310 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 SptbP15508 2128 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 4930563M21RikA0A1L1SUT5 578 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r138D3YTY2 306 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm8693E9PW18 306 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Zfp961E9Q4R5 444 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm4498K9J7G4 306 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r118L7N273 306 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 MfngO09008 321 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Stc2O88452 296 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Rims4P60191 269 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Rab11aP62492 216 aaKnown RBP10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Has2P70312 552 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Abhd12Q99LR1 398 aaKnown RBP10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tnk1Q99ML2 666 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 2610524H06RikQ9CZU9 139 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 TrilQ9DBY4 809 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ap4m1Q9JKC7 449 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1410E9PYK6 323 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 C5ar1P30993 351 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Htr2aP35363 471 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Klhdc2Q4G5Y1 406 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Hoxc12Q8K5B8 280 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Myct1Q8R411 188 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Arpc5lQ9D898 153 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 RangrfQ9JIB0 185 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Npas3Q9QZQ0 925 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 EdarQ9R187 448 aa10.49□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ino80eA0A0U1RP99 260 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Csrp2P97314 193 aaKnown RBP10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 McptlQ00356 246 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Rpusd3Q14AI6 344 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr1287Q7TQY1 305 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr453Q7TRV7 317 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Rdh9Q8K5C8 317 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lsm10Q8QZX5 122 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 ApehQ8R146 732 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Adam11Q9R1V4 773 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Trbv26A0A0B4J1P5 115 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm16368A0A1Y7VNG9 144 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Zfp707F6QUN2 391 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Trav13d-3J3QMG8 112 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lcn12Q6JVL5 193 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr923Q7TRB9 317 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Pcyt1bQ811Q9 369 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm10600Q8BQ57 223 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Tssk5Q8C1R0 372 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Klf17Q8CFA7 341 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mid1ip1Q9CQ20 182 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Masp1P98064 704 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Olfr332Q5NC45 344 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mettl27Q8BGM4 238 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Lgi3Q8K406 548 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r66Q8K4I0 310 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Nt5dc2Q91X76 390 aaKnown RBP10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 GmppaQ922H4 420 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 SvbpQ99LQ4 66 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mdp1Q9D967 164 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 1700025F22RikQ9D9Y7 111 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Dnase2bQ9QY48 354 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r60G3UY47 300 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm5225J3QPL3 108 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 StumQ0VBF8 141 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 KcnrgQ2TUM3 264 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Zfp954Q7TNU5 416 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Defb21Q8C5Z4 100 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Slc38a1Q8K2P7 485 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Vmn1r37Q8R2E4 302 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Nudt16l1Q8VHN8 211 aaKnown RBP10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Ramp3Q9WUP1 147 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm45861A0A1B0GRY3 1923 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Morn1A2RTS7 477 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Gm21788J3QNH3 180 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Nipsnap1O55125 284 aa10.48□□□□□ -0.73
Pcif1-201ENSMUST00000041643 Mamld1P0C6A2 803 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms