RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HLA-GP17693 338 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 PI3P19957 117 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 GLRA1P23415 457 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 FCGR2CP31995 323 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 GMFBP60983 142 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 EXOSC2Q13868 293 aaKnown RBP13.89□□□□□ -0.19
PHGDH-216ENST00000641375 OR5M8Q8NGP6 311 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 CASTOR1Q8WTX7 329 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 ELMOD3Q96FG2 381 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 KIF25Q9UIL4 384 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 ZNF98A6NK75 572 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 SIRPB1O00241 398 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 CCL21O00585 134 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 ABCD4O14678 606 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 SIX6O95475 246 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 SFT2D2O95562 160 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 HAND1O96004 215 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 TK1P04183 234 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 SMIM21Q3B7S5 101 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 ACP7Q6ZNF0 438 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 OR11H4Q8NGC9 324 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 MRPL24Q96A35 216 aaKnown RBP13.89□□□□□ -0.19
PHGDH-216ENST00000641375 TMPRSS13Q9BYE2 586 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 LIME1Q9H400 295 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 RASL12Q9NYN1 266 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 TAAR3PQ9P1P4 343 aa13.89□□□□□ -0.19
PHGDH-216ENST00000641375 CHD3Q12873 2000 aaKnown RBP13.88□□□□□ -0.19
PHGDH-216ENST00000641375 A0A0B4J2A0 478 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 C3orf80F5H4A9 247 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 G3V3Q6 166 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 ZNF728P0DKX0 622 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 LMO1P25800 156 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 CHRNB4P30926 498 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 UCP3P55916 312 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 ZNF880Q6PDB4 577 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 CLEC18BQ6UXF7 455 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 MOB1BQ7L9L4 216 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 MOB3AQ96BX8 217 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 MRPL37Q9BZE1 423 aaKnown RBP13.88□□□□□ -0.19
PHGDH-216ENST00000641375 C1orf123Q9NWV4 160 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 SHPKQ9UHJ6 478 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 DPRXA6NFQ7 191 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 KNG1P01042 644 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 CFHR2P36980 270 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 HERV-K104P61576 105 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 FLI1Q01543 452 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-216ENST00000641375 BSPH1Q075Z2 132 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 IGSF11Q5DX21 431 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 LY6G6FQ5SQ64 297 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 DCAF12L2Q5VW00 463 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 COQ8AQ8NI60 647 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 GSX2Q9BZM3 304 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 MED9Q9NWA0 146 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 RDH8Q9NYR8 311 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 OR14J1Q9UGF5 321 aa13.88□□□□□ -0.19
PHGDH-216ENST00000641375 NUP62P37198 522 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-216ENST00000641375 SUPT4H1P63272 117 aaKnown RBP13.87□□□□□ -0.19
PHGDH-216ENST00000641375 ZNF497Q6ZNH5 498 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 SGPP2Q8IWX5 399 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 GAPTQ8N292 157 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 OR5T2Q8NGG2 359 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 PRR7Q8TB68 274 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 TOMM40LQ969M1 308 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 OR2V2Q96R30 315 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 FXYD6Q9H0Q3 95 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 ZDHHC8Q9ULC8 765 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 SESN1Q9Y6P5 492 aa13.87□□□□□ -0.19
PHGDH-216ENST00000641375 PLCE1Q9P212 2302 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 DBX1A6NMT0 343 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 KRBOX1C9JBD0 128 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 IFNL4K9M1U5 179 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 WNT9BO14905 357 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 DIRAS3O95661 229 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 SCTP09683 121 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 ZNF81P51508 661 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 SEC61A1P61619 476 aaKnown RBP13.86□□□□□ -0.19
PHGDH-216ENST00000641375 SRSF4Q08170 494 aaKnown RBP13.86□□□□□ -0.19
PHGDH-216ENST00000641375 FBXL19-AS1Q494R0 122 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 ABCA11PQ4W5N1 156 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 C20orf204Q6ZNR8 217 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 KCTD9Q7L273 389 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 OR4A4PQ8NGN8 299 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 LRRC29Q8WV35 223 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 MEGF10Q96KG7 1140 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 PCDHB10Q9UN67 800 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 MAB21L2Q9Y586 359 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 PPYP01298 95 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 FXYD4P59646 89 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 LY6DQ14210 128 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 FAM90A1Q86YD7 464 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 PIK3IP1Q96FE7 263 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 PDCD10Q9BUL8 212 aa13.86□□□□□ -0.19
PHGDH-216ENST00000641375 ESRP2Q9H6T0 727 aaKnown RBP13.86□□□□□ -0.19
PHGDH-216ENST00000641375 VSTM5A8MXK1 200 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 SPRY3O43610 288 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 IFNA2P01563 188 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 RPS2P15880 293 aaKnown RBP13.85□□□□□ -0.19
PHGDH-216ENST00000641375 TNFSF4P23510 183 aa13.85□□□□□ -0.19
PHGDH-216ENST00000641375 NFYAP23511 347 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms