RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 SULT4A1Q9BR01 284 aa12.52□□□□□ -0.41
PAX6-268ENST00000640287 GAL3ST2Q9H3Q3 398 aa12.52□□□□□ -0.41
PAX6-268ENST00000640287 CHMP1AQ9HD42 196 aaPredicted RBP12.52□□□□□ -0.41
PAX6-268ENST00000640287 RHBDL2Q9NX52 303 aa12.52□□□□□ -0.41
PAX6-268ENST00000640287 RSL24D1Q9UHA3 163 aaKnown RBP12.52□□□□□ -0.41
PAX6-268ENST00000640287 OPN4Q9UHM6 478 aa12.52□□□□□ -0.41
PAX6-268ENST00000640287 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.41
PAX6-268ENST00000640287 SPATA2Q9UM82 520 aa12.52□□□□□ -0.41
PAX6-268ENST00000640287 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
PAX6-268ENST00000640287 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.41
PAX6-268ENST00000640287 MRPS15P82914 257 aaKnown RBP12.51□□□□□ -0.41
PAX6-268ENST00000640287 MOGAT2Q3SYC2 334 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 ZNF497Q6ZNH5 498 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 TCF23Q7RTU1 214 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 SAMD12Q8N8I0 201 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 OR10R2Q8NGX6 335 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 SIRPDQ9H106 197 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
PAX6-268ENST00000640287 COMMD3Q9UBI1 195 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
PAX6-268ENST00000640287 IGHV3OR16-10A0A075B7F0 116 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 TRAV39A0A0B4J263 110 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 TRAV40A0A0B4J280 105 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 CA11O75493 328 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 SCGNO76038 276 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 ZNF182P17025 639 aaPredicted RBP12.5□□□□□ -0.41
PAX6-268ENST00000640287 PAX5Q02548 391 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 PRB3Q04118 309 aaPredicted RBP12.5□□□□□ -0.41
PAX6-268ENST00000640287 CHRFAM7AQ494W8 412 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 C1orf229Q6ZS94 237 aaPredicted RBP12.5□□□□□ -0.41
PAX6-268ENST00000640287 RTN4RL2Q86UN3 420 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 Q8N7P7 452 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 OR4K15Q8NH41 348 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 ACOT12Q8WYK0 555 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 LHX4Q969G2 390 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 UPRTQ96BW1 309 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 CYYR1Q96J86 154 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 TBX15Q96SF7 602 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 PECRQ9BY49 303 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 HSF4Q9ULV5 492 aa12.5□□□□□ -0.41
PAX6-268ENST00000640287 NSD1Q96L73 2696 aaPredicted RBP12.49□□□□□ -0.41
PAX6-268ENST00000640287 FOXI3A8MTJ6 420 aaPredicted RBP12.49□□□□□ -0.41
PAX6-268ENST00000640287 RAB27BO00194 218 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 MT-ND4P03905 459 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 MMP9P14780 707 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 DLX1P56177 255 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 TMEM50BP56557 158 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 PLAC9Q5JTB6 97 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 UBE2NLQ5JXB2 153 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 GPR157Q5UAW9 335 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 MZT2AQ6P582 158 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
PAX6-268ENST00000640287 C1orf122Q6ZSJ8 110 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 SETD6Q8TBK2 473 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 SLC25A38Q96DW6 304 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 NCOR1P1Q9H4R4 102 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 ZMAT3Q9HA38 289 aaKnown RBP12.49□□□□□ -0.41
PAX6-268ENST00000640287 TAS2R3Q9NYW6 316 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 AK3Q9UIJ7 227 aa12.49□□□□□ -0.41
PAX6-268ENST00000640287 ANK3Q12955 4377 aaKnown RBP12.49□□□□□ -0.41
PAX6-268ENST00000640287 SMIM31A0A1B0GVY4 71 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 CLPXO76031 633 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 GNB3P16520 340 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 SRD5A1P18405 259 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 ERVFRD-1P60508 538 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 LURAP1LQ8IV03 231 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 CORO2AQ92828 525 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 S100A16Q96FQ6 103 aaKnown RBP12.48□□□□□ -0.41
PAX6-268ENST00000640287 CMSS1Q9BQ75 279 aaKnown RBP12.48□□□□□ -0.41
PAX6-268ENST00000640287 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
PAX6-268ENST00000640287 DIABLOQ9NR28 239 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 CALYQ9NYX4 217 aa12.48□□□□□ -0.41
PAX6-268ENST00000640287 ZNF729A6NN14 1252 aaPredicted RBP12.47□□□□□ -0.41
PAX6-268ENST00000640287 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 CD3GP09693 182 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 IGHV1-8P0DP01 117 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 IGHV4-38-2P0DP08 117 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 HIST1H1DP16402 221 aaKnown RBP12.47□□□□□ -0.41
PAX6-268ENST00000640287 OMGP23515 440 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 PRTN3P24158 256 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 COX7A1P24310 79 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 CDK2P24941 298 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 SSTR5P35346 364 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 DLX6P56179 175 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 ARL6IP1Q15041 203 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 OLFML2AQ68BL7 652 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 NCR3LG1Q68D85 454 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 MRPL30Q8TCC3 161 aaKnown RBP12.47□□□□□ -0.41
PAX6-268ENST00000640287 DYNC2LI1Q8TCX1 351 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 C12orf4Q9NQ89 552 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 KCNIP1Q9NZI2 227 aa12.47□□□□□ -0.41
PAX6-268ENST00000640287 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
PAX6-268ENST00000640287 KBTBD11-OT1A0A1B0GTJ5 212 aa12.46□□□□□ -0.41
PAX6-268ENST00000640287 DPPA5A6NC42 116 aa12.46□□□□□ -0.41
PAX6-268ENST00000640287 CRLF1O75462 422 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms