RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 IGFBP7Q16270 282 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 FAM185AQ8N0U4 392 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 C1orf162Q8NEQ5 155 aaPredicted RBP12.83□□□□□ -0.35
TRIM3-215ENST00000639856 OR1S2Q8NGQ3 325 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 ZNF488Q96MN9 340 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 OR51I2Q9H344 312 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.35
TRIM3-215ENST00000639856 LSM5Q9Y4Y9 91 aaKnown RBP12.83□□□□□ -0.35
TRIM3-215ENST00000639856 ATP23Q9Y6H3 246 aa12.83□□□□□ -0.35
TRIM3-215ENST00000639856 K7EPK0 472 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 PHF1O43189 567 aaPredicted RBP12.83□□□□□ -0.36
TRIM3-215ENST00000639856 GNRHRP30968 328 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 EIF5AP63241 154 aaKnown RBP12.83□□□□□ -0.36
TRIM3-215ENST00000639856 IL13RA2Q14627 380 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 ZNF474Q6S9Z5 364 aaPredicted RBP12.83□□□□□ -0.36
TRIM3-215ENST00000639856 FAM58AQ8N1B3 248 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 SUMF2Q8NBJ7 301 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 MARC2Q969Z3 335 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 OR2J1Q9GZK6 312 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 OR2S2Q9NQN1 319 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.36
TRIM3-215ENST00000639856 TRDCB7Z8K6 153 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 J3QT63 122 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 BET1O15155 118 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 MPPED1O15442 326 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 SCGB1D2O95969 90 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 IGKV3-15P01624 115 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 MBPP02686 304 aaPredicted RBP12.82□□□□□ -0.36
TRIM3-215ENST00000639856 CTXN2P0C2S0 81 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 CBR1P16152 277 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 KCNJ3P48549 501 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 PPP1CBP62140 327 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 HERPUD1Q15011 391 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 BHLHA15Q7RTS1 189 aaPredicted RBP12.82□□□□□ -0.36
TRIM3-215ENST00000639856 C5orf24Q7Z6I8 188 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 ASF1BQ9NVP2 202 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 COQ3Q9NZJ6 369 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 FBXO9Q9UK97 447 aaPredicted RBP12.82□□□□□ -0.36
TRIM3-215ENST00000639856 SPTA1P02549 2419 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 LOC105371267A0A1B0GV96 52 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 RHBDL1O75783 438 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 GLAP06280 429 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 FAM157CP0CG43 387 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 TIMP3P35625 211 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 P2RY6Q15077 328 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 RPL7L1Q6DKI1 246 aaKnown RBP12.82□□□□□ -0.36
TRIM3-215ENST00000639856 LDLRAD3Q86YD5 345 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 LHFPL5Q8TAF8 219 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 BOD1Q96IK1 185 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 RTL8AQ9BWD3 113 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 PLEKHA2Q9HB19 425 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 RHOFQ9HBH0 211 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 TMED3Q9Y3Q3 217 aa12.82□□□□□ -0.36
TRIM3-215ENST00000639856 TRBV6-6A0A0A6YYG2 114 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 TRAV24A0A0B4J272 114 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 RAB19A4D1S5 217 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 HS3ST1O14792 307 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 TUSC2O75896 110 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 SLC34A2O95436 690 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 CECR9P0C854 216 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
TRIM3-215ENST00000639856 RND3P61587 244 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 ALKBH6Q3KRA9 238 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 UQCC3Q6UW78 93 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 BEND4Q6ZU67 534 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 MRPL30Q8TCC3 161 aaKnown RBP12.81□□□□□ -0.36
TRIM3-215ENST00000639856 SECTM1Q8WVN6 248 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 SNRNP40Q96DI7 357 aaKnown RBP12.81□□□□□ -0.36
TRIM3-215ENST00000639856 IFT22Q9H7X7 185 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 TAF9BQ9HBM6 251 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 ZFP57Q9NU63 452 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 GLS2Q9UI32 602 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 TINAGQ9UJW2 476 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 AMDHD2Q9Y303 409 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 PCNX1Q96RV3 2341 aa12.81□□□□□ -0.36
TRIM3-215ENST00000639856 HEATR1Q9H583 2144 aaKnown RBP12.81□□□□□ -0.36
TRIM3-215ENST00000639856 IGKV1-6A0A0C4DH72 117 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 E5RGE8 158 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 SRPXP78539 464 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 FAM76BQ5HYJ3 339 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 EIF5AL1Q6IS14 154 aaKnown RBP12.8□□□□□ -0.36
TRIM3-215ENST00000639856 DOLPP1Q86YN1 238 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 SLC35G3Q8N808 338 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 ZNF565Q8N9K5 539 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
TRIM3-215ENST00000639856 SPERTQ8NA61 448 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 SLC25A40Q8TBP6 338 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 RDH5Q92781 318 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 TMEM222Q9H0R3 208 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 SPEF1Q9Y4P9 236 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 ATRXP46100 2492 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 LRP5LA4QPB2 252 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 OR5H1A6NKK0 313 aa12.8□□□□□ -0.36
TRIM3-215ENST00000639856 CEACAM8P31997 349 aaPredicted RBP12.8□□□□□ -0.36
TRIM3-215ENST00000639856 UCP2P55851 309 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms