RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 UBE2NLQ5JXB2 153 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 MZT2AQ6P582 158 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 Q6ZTK2 550 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 SAMD12Q8N8I0 201 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 DYRK2Q92630 601 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 DGCR14Q96DF8 476 aaKnown RBP13.17□□□□□ -0.3
CLN6-216ENST00000636876 RAB3CQ96E17 227 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 PECRQ9BY49 303 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 ABCG5Q9H222 651 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 COMMD3Q9UBI1 195 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 KPTNQ9Y664 436 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 MXRA5Q9NR99 2828 aa13.17□□□□□ -0.3
CLN6-216ENST00000636876 MEIKINA0A087WXM9 373 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 A0A1W2PPH5 198 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 MEX3AA1L020 520 aaKnown RBP13.16□□□□□ -0.3
CLN6-216ENST00000636876 MT-ND4P03905 459 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 CCL3L1P16619 93 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 FOXB2Q5VYV0 432 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 CMTM4Q8IZR5 234 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 GAPTQ8N292 157 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 CORO2AQ92828 525 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 SIRPDQ9H106 197 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 OR6C3Q9NZP0 311 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 OPN4Q9UHM6 478 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 UBE2J1Q9Y385 318 aaPredicted RBP13.16□□□□□ -0.3
CLN6-216ENST00000636876 AUP1Q9Y679 476 aa13.16□□□□□ -0.3
CLN6-216ENST00000636876 A0A0A6YYH2 397 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 A6NJ64 397 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 M0R1W7 72 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 MFNGO00587 321 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 AVPP01185 164 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 ZNF728P0DKX0 622 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 MMP9P14780 707 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 HIST1H1DP16402 221 aaKnown RBP13.15□□□□□ -0.3
CLN6-216ENST00000636876 GLP1RP43220 463 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 DLX6P56179 175 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 C1orf122Q6ZSJ8 110 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 TRAPPC6BQ86SZ2 158 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 Q8N7P7 452 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 PHF21AQ96BD5 680 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 CMTM3Q96MX0 182 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 ZNF714Q96N38 554 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 WDFY2Q96P53 400 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 TAS2R3Q9NYW6 316 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 KCNK7Q9Y2U2 307 aa13.15□□□□□ -0.3
CLN6-216ENST00000636876 FN1P02751 2386 aaKnown RBP13.14□□□□□ -0.31
CLN6-216ENST00000636876 A6NHS1 94 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 HPGDSO60760 199 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 TOX4O94842 621 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 APOA1P02647 267 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 GNB3P16520 340 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 ARL6IP1Q15041 203 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 OLFML2AQ68BL7 652 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 C1orf229Q6ZS94 237 aaPredicted RBP13.14□□□□□ -0.31
CLN6-216ENST00000636876 Q71RC1 249 aaPredicted RBP13.14□□□□□ -0.31
CLN6-216ENST00000636876 OR13A1Q8NGR1 328 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 MRPL30Q8TCC3 161 aaKnown RBP13.14□□□□□ -0.31
CLN6-216ENST00000636876 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 DCUN1D5Q9BTE7 237 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 SLIRPQ9GZT3 109 aaKnown RBP13.14□□□□□ -0.31
CLN6-216ENST00000636876 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 DNHD1Q96M86 4753 aa13.14□□□□□ -0.31
CLN6-216ENST00000636876 A0A075B6Q4 140 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 TRAV39A0A0B4J263 110 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 ZNF729A6NN14 1252 aaPredicted RBP13.13□□□□□ -0.31
CLN6-216ENST00000636876 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 C17orf98A8MV24 154 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 NAPSAO96009 420 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 RBP4P02753 201 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 EIF4EP06730 217 aaKnown RBP13.13□□□□□ -0.31
CLN6-216ENST00000636876 CGB3P0DN86 165 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 CGB7P0DN87 165 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 CDK2P24941 298 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 CDNFQ49AH0 187 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 FAM120AOSQ5T036 256 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 C11orf42Q8N5U0 333 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 ZNF565Q8N9K5 539 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 OR4K15Q8NH41 348 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 MRGPRDQ8TDS7 321 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 CCDC107Q8WV48 283 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 UPRTQ96BW1 309 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 S100A16Q96FQ6 103 aaKnown RBP13.13□□□□□ -0.31
CLN6-216ENST00000636876 TBX15Q96SF7 602 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
CLN6-216ENST00000636876 GAL3ST2Q9H3Q3 398 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 METTL8Q9H825 291 aaKnown RBP13.13□□□□□ -0.31
CLN6-216ENST00000636876 UNKLQ9H9P5 680 aaKnown RBP13.13□□□□□ -0.31
CLN6-216ENST00000636876 ZMAT3Q9HA38 289 aaKnown RBP13.13□□□□□ -0.31
CLN6-216ENST00000636876 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLN6-216ENST00000636876 TRAPPC2LQ9UL33 140 aa13.13□□□□□ -0.31
CLN6-216ENST00000636876 TRAV18A0A075B6X5 111 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 hCG_1809904A0A1W2PP81 198 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 A0A1W2PPE2 198 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 A0A1W2PR64 198 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms