RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 THOC3Q96J01 351 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 GINS3Q9BRX5 216 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 SLC35B3Q9H1N7 401 aa12.04□□□□□ -0.48
CACNA1A-228ENST00000636610 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 OR1K1Q8NGR3 316 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 SIGLEC12Q96PQ1 595 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 TCFL5Q9UL49 500 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 POMT1Q9Y6A1 747 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 ROS1P08922 2347 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 OR2C1O95371 312 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 S100A9P06702 114 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 HEXAP06865 529 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 FGF8P55075 233 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 C15orf54Q8N8G6 183 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 OR4D5Q8NGN0 318 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 CPNE4Q96A23 557 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 INTS12Q96CB8 462 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 SGCZQ96LD1 299 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 SH2D2AQ9NP31 389 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 TRDCB7Z8K6 153 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 PRSS44E7EML9 344 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 HMGB3O15347 200 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 RHBDL1O75783 438 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 MDKP21741 143 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 MAGEA5P43359 124 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 RND3P61587 244 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 ZXDAP98168 799 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 THNSL2Q86YJ6 484 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 SELENOHQ8IZQ5 122 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 CYB561D1Q8N8Q1 229 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 LILRB1Q8NHL6 650 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 C10orf35Q96D05 121 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 IFT22Q9H7X7 185 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 ERRFI1Q9UJM3 462 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
CACNA1A-228ENST00000636610 TRAV20A0A0B4J274 112 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 CA11O75493 328 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 MT-ND4LP03901 98 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 OR2B11Q5JQS5 317 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 GPR157Q5UAW9 335 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 TMEM42Q69YG0 159 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 FAM53AQ6NSI3 398 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 RSG1Q9BU20 258 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 SF3B5Q9BWJ5 86 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 PPP1R3CQ9UQK1 317 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 ZFP92A6NM28 416 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 MMP7P09237 267 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 IL13RA2Q14627 380 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 HIKESHIQ53FT3 197 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 OR2T2Q6IF00 324 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 LCN15Q6UWW0 184 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 CLDN23Q96B33 292 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 CADP27708 2225 aa12.02□□□□□ -0.49
CACNA1A-228ENST00000636610 TTC28Q96AY4 2481 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 TAGLN2P37802 199 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 RAB1AP62820 205 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 PBDC1Q9BVG4 233 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 OR1A1Q9P1Q5 309 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 BDP1A6H8Y1 2624 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 RBFOX3A6NFN3 312 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 C5orf52A6NGY3 159 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 TFF1P04155 84 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 PSG2P11465 335 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 CA6P23280 308 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 OR8B8Q15620 311 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 LYPD6BQ8NI32 183 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 CT55Q8WUE5 264 aa12.01□□□□□ -0.49
CACNA1A-228ENST00000636610 H3BQ15 152 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 RPL36A-HNRNPH2H7BZ11 118 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 K7N7A8 449 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 PCBD1P61457 104 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 C4orf17Q53FE4 359 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 TMEM211Q6ICI0 200 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 ZNF100Q8IYN0 542 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 ZNF561Q8N587 486 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 VSIRQ9H7M9 311 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 GNG13Q9P2W3 67 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 KCNS2Q9ULS6 477 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 SMG1Q96Q15 3661 aaKnown RBP12□□□□□ -0.49
CACNA1A-228ENST00000636610 SIRPB1O00241 398 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 HSPA12AO43301 675 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 METTL15P1P0C7V9 234 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 UBE2KP61086 200 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 MPV17LQ2QL34 196 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 PNPLA5Q7Z6Z6 429 aaPredicted RBP12□□□□□ -0.49
CACNA1A-228ENST00000636610 ODF3L1Q8IXM7 274 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 IL22RA1Q8N6P7 574 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 OR1J1Q8NGS3 322 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 RAB39BQ96DA2 213 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 ARV1Q9H2C2 271 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 Q9N2K0 584 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 PQLC2LA1A4F0 135 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 WDR1O75083 606 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 NDUFA6P56556 154 aa12□□□□□ -0.49
CACNA1A-228ENST00000636610 ZNF674Q2M3X9 581 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms