RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 LRRC36Q1X8D7 754 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 KHDC1LQ5JSQ8 128 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 XAF1Q6GPH4 301 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 Q6ZS46 218 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 LINC00596Q86U02 117 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 OR4X2Q8NGF9 303 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 TMEM80Q96HE8 168 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 OCSTAMPQ9BR26 566 aa14.34□□□□□ -0.11
PNKP-225ENST00000636214 DPCDQ9BVM2 203 aaPredicted RBP14.34□□□□□ -0.11
PNKP-225ENST00000636214 TCRBV4S1A1TA0A5B7 111 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 CLIC3O95833 236 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 LPLP06858 475 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 SERPINA2P20848 420 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 GNG10P50151 68 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 RBM11P57052 281 aaKnown RBP14.33□□□□□ -0.12
PNKP-225ENST00000636214 MADCAM1Q13477 382 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 HES1Q14469 280 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 BEAN1Q3B7T3 259 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 ATAD3CQ5T2N8 411 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 SAMD5Q5TGI4 173 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 RSBN1Q5VWQ0 802 aaPredicted RBP14.33□□□□□ -0.12
PNKP-225ENST00000636214 REC114Q7Z4M0 266 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 DHRSXQ8N5I4 330 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 SUMF2Q8NBJ7 301 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 OR10A7Q8NGE5 316 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 OR10X1Q8NGY0 326 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 OR52N1Q8NH53 320 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 RFESDQ8TAC1 157 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 IL36GQ9NZH8 169 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 MOB4Q9Y3A3 225 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 HSPE1-MOB4S4R3N1 261 aa14.33□□□□□ -0.12
PNKP-225ENST00000636214 TMEM30CPA0ZSE6 113 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 J3QR06 171 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 IGHV3-7P01780 117 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 PF4P02776 101 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 CD33P20138 364 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 TAS2R43P59537 309 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 GPR176Q14439 515 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 NHLRC3Q5JS37 347 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 ASCL4Q6XD76 172 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 STX19Q8N4C7 294 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 PACRGLQ8N7B6 248 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 PLPPR1Q8TBJ4 325 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 WIPF2Q8TF74 440 aaPredicted RBP14.32□□□□□ -0.12
PNKP-225ENST00000636214 SGCDQ92629 289 aa14.32□□□□□ -0.12
PNKP-225ENST00000636214 ZNF184Q99676 751 aaPredicted RBP14.32□□□□□ -0.12
PNKP-225ENST00000636214 TSSC4Q9Y5U2 329 aaPredicted RBP14.32□□□□□ -0.12
PNKP-225ENST00000636214 OGG1O15527 345 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 GTF2F2P13984 249 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 SSTR5P35346 364 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 RAB7AP51149 207 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 PAX5Q02548 391 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 MPV17LQ2QL34 196 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 Q499Y3 187 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 SLC22A6Q4U2R8 563 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 YIF1BQ5BJH7 314 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 SLC16A12Q6ZSM3 486 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 Q8NFD4 153 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 GHSRQ92847 366 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 LEAP2Q969E1 77 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 IFT22Q9H7X7 185 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 RAB9BQ9NP90 201 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 PSG11Q9UQ72 335 aa14.31□□□□□ -0.12
PNKP-225ENST00000636214 EFCAB10A6NFE3 127 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 LY6LH3BQJ8 138 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 GEMIN2O14893 280 aaKnown RBP14.3□□□□□ -0.12
PNKP-225ENST00000636214 MYL12BO14950 172 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 SNRNP70P08621 437 aaKnown RBP14.3□□□□□ -0.12
PNKP-225ENST00000636214 CGB3P0DN86 165 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 CGB7P0DN87 165 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 TMEM11P17152 192 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 GZMHP20718 246 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 CD83Q01151 205 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 THNSL2Q86YJ6 484 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 OR8H3Q8N146 312 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 JAGN1Q8N5M9 183 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 OR13C5Q8NGS8 318 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 OR56B4Q8NH76 319 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 SPACA1Q9HBV2 294 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 CLEC2DQ9UHP7 191 aa14.3□□□□□ -0.12
PNKP-225ENST00000636214 SIRT4Q9Y6E7 314 aaPredicted RBP14.3□□□□□ -0.12
PNKP-225ENST00000636214 TRAV39A0A0B4J263 110 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 TRBV5-5A0A0J9YX44 114 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 NPIPB11E5RHQ5 1161 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 IL3RAP26951 378 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 ST3GAL4Q11206 333 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 OXLD1Q5BKU9 147 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 KPRPQ5T749 579 aaPredicted RBP14.29□□□□□ -0.12
PNKP-225ENST00000636214 DMKNQ6E0U4 476 aaPredicted RBP14.29□□□□□ -0.12
PNKP-225ENST00000636214 C8orf59Q8N0T1 100 aaPredicted RBP14.29□□□□□ -0.12
PNKP-225ENST00000636214 DRAM1Q8N682 238 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 ZFP41Q8N8Y5 198 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 ORAI1Q96D31 301 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 VCXQ9H320 206 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 LINC00574Q9H8X3 128 aa14.29□□□□□ -0.12
PNKP-225ENST00000636214 PNMA8CA0A1B0GUJ8 204 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 SH2D7A6NKC9 451 aaPredicted RBP14.28□□□□□ -0.12
PNKP-225ENST00000636214 ADARB2-AS1A8MUL3 147 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 AIPO00170 330 aa14.28□□□□□ -0.12
PNKP-225ENST00000636214 HSD17B6O14756 317 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms