RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 GP2P55259 537 aaKnown RBP12.63□□□□□ -0.39
LINC00339-209ENST00000635450 PROK1P58294 105 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 DYNC1I2Q13409 638 aaKnown RBP12.63□□□□□ -0.39
LINC00339-209ENST00000635450 HIST2H2BDQ6DRA6 164 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 TMEM91Q6ZNR0 172 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 LRRTM1Q86UE6 522 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 BEND2Q8NDZ0 799 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 SELENOIQ9C0D9 397 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 NCOR1P1Q9H4R4 102 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 KIF25Q9UIL4 384 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 VPREB3Q9UKI3 123 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 TBL2Q9Y4P3 447 aaKnown RBP12.63□□□□□ -0.39
LINC00339-209ENST00000635450 RNF114Q9Y508 228 aa12.63□□□□□ -0.39
LINC00339-209ENST00000635450 H3BUI4 141 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 MGMTP16455 207 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 CDK2P24941 298 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 GLP1RP43220 463 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
LINC00339-209ENST00000635450 ZNF626Q68DY1 528 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 HEPN1Q6WQI6 88 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 LYPD6Q86Y78 171 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 OR11H6Q8NGC7 330 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 OR5R1Q8NH85 324 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 FCGR1BQ92637 280 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 CLEC7AQ9BXN2 247 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 TMEM133Q9H2Q1 129 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 BANF2Q9H503 90 aa12.62□□□□□ -0.39
LINC00339-209ENST00000635450 TET2Q6N021 2002 aaPredicted RBP12.61□□□□□ -0.39
LINC00339-209ENST00000635450 IGHV2-26A0A0B4J1V2 119 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 A0A1B0GUS0 222 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A10PA6NDY2 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A18PA6NE21 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A16PA6NEW6 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A20PA6NIJ5 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A8PA6NJQ4 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A7PA6NKC0 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A22PA8MWA6 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A12PA8MX19 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A5PA8MXJ8 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A23PA8MXZ1 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 MCRIP1C9JLW8 97 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A15PP0C7V4 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A13PP0C7W8 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A14PP0C7W9 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM90A24PP0C7X0 464 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 CALRP27797 417 aaKnown RBP12.61□□□□□ -0.39
LINC00339-209ENST00000635450 HTR2CP28335 458 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 RANBP1P43487 201 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 RPL15P61313 204 aaKnown RBP12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FABP5Q01469 135 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 PAX5Q02548 391 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 C1orf100Q5SVJ3 147 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 PRAMEF5Q5TYX0 476 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 RSBN1Q5VWQ0 802 aaPredicted RBP12.61□□□□□ -0.39
LINC00339-209ENST00000635450 DHRS7BQ6IAN0 325 aaPredicted RBP12.61□□□□□ -0.39
LINC00339-209ENST00000635450 SLC35E4Q6ICL7 350 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 GDPGP1Q6ZNW5 385 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 SPARTQ8N0X7 666 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 PLPPR1Q8TBJ4 325 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 FAM46BQ96A09 425 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 SSX3Q99909 188 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 MEGF9Q9H1U4 602 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 PLGRKTQ9HBL7 147 aa12.61□□□□□ -0.39
LINC00339-209ENST00000635450 KBTBD11-OT1A0A1B0GTJ5 212 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 TMEM30CPA0ZSE6 113 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 ODF3BA8MYP8 253 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 H3BUX3 64 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 CCRL2O00421 344 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 MMP23AO75900 390 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 TSPAN15O95858 294 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 MPIG6BO95866 241 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 PSMB9P28065 219 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 SSX1Q16384 188 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 LY6EQ16553 131 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 LRRC75BQ2VPJ9 315 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 LHFPL4Q7Z7J7 247 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 RTN4RL2Q86UN3 420 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 TMEM104Q8NE00 496 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 OR13A1Q8NGR1 328 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 ZNF596Q8TC21 504 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 NDUFB11Q9NX14 153 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 ZNF581Q9P0T4 197 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 SIGLEC9Q9Y336 463 aa12.6□□□□□ -0.39
LINC00339-209ENST00000635450 AK6Q9Y3D8 172 aaKnown RBP12.6□□□□□ -0.39
LINC00339-209ENST00000635450 TOR1AO14656 332 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 FUT3P21217 361 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 NFYBP25208 207 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 PSMD7P51665 324 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 AANATQ16613 207 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 C17orf58Q2M2W7 97 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 RAB12Q6IQ22 244 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 ZNF773Q6PK81 442 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 ABHD12Q8N2K0 398 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 KCNG3Q8TAE7 436 aa12.59□□□□□ -0.39
LINC00339-209ENST00000635450 MRGPRDQ8TDS7 321 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms