RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 RNF152Q8N8N0 203 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 OR13C9Q8NGT0 318 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 OR2G2Q8NGZ5 317 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 MRGPRDQ8TDS7 321 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 C4orf3Q8WVX3 66 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 SORL1Q92673 2214 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 MBOAT4Q96T53 435 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 NCOR1P1Q9H4R4 102 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 LINC00574Q9H8X3 128 aa12.24□□□□□ -0.45
PDLIM3-213ENST00000629667 IGHV1-3A0A0C4DH29 117 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 A0A1W2PPE3 182 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 NPIPB11E5RHQ5 1161 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 MT-ND2P03891 347 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 T-ENOLP0DO92 83 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 DBTP11182 482 aaKnown RBP12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 VDAC1P21796 283 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 REG1BP48304 166 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 INSL3P51460 131 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 ISL1P61371 349 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 Q8N9W7 124 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 OR11H1Q8NG94 326 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 OR10A7Q8NGE5 316 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 OR13C3Q8NGS6 347 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 OR2T10Q8NGZ9 312 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 UTP4Q969X6 686 aaKnown RBP12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 NR1H4Q96RI1 486 aaPredicted RBP12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 GAR1Q9NY12 217 aaKnown RBP12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 FRRS1LQ9P0K9 344 aa12.23□□□□□ -0.45
PDLIM3-213ENST00000629667 HCKP08631 526 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 SSTR5P35346 364 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 MTNR1BP49286 362 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 ZNF85Q03923 595 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 FHL3Q13643 280 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 FAM27D1Q5T7N8 215 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 RNF166Q96A37 237 aaPredicted RBP12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 MYRFQ9Y2G1 1151 aa12.22□□□□□ -0.45
PDLIM3-213ENST00000629667 TRAV24A0A0B4J272 114 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 LCE6AA0A183 80 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 TCRBV3S1A0A5B6 114 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 G3V2T6 193 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 IGHG4P01861 327 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 GYS2P54840 703 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 KISS1Q15726 138 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 RSBN1Q5VWQ0 802 aaPredicted RBP12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 OVCH2Q7RTZ1 564 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 Q8N6K4 173 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 OR51A4Q8NGJ6 313 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 OR10AC1Q8NH08 325 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 CNIH3Q8TBE1 160 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 RFKQ969G6 155 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 S1PR3Q99500 378 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 ZCCHC4Q9H5U6 513 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 ZMAT4Q9H898 229 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 FAM118AQ9NWS6 357 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 ENOPH1Q9UHY7 261 aa12.21□□□□□ -0.45
PDLIM3-213ENST00000629667 BIRC6Q9NR09 4857 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 HTR1AP08908 422 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 OR8U8P0C7N1 319 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 PSMB8P28062 276 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 KCNJ3P48549 501 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 NANOS3P60323 173 aaKnown RBP12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 ZP1P60852 638 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 CFHR3Q02985 330 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 TMED1Q13445 227 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 KDM4DQ6B0I6 523 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 KCTD20Q7Z5Y7 419 aa12.2□□□□□ -0.46
PDLIM3-213ENST00000629667 TRAV39A0A0B4J263 110 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 MOSP00540 346 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 OR5H8P0DN80 308 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 CD1BP29016 333 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 SOX6P35712 828 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 CCR9P51686 369 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 PAX5Q02548 391 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 ZSCAN26Q16670 478 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 ELP2Q6IA86 826 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 FDX2Q6P4F2 183 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF429Q86V71 674 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 OR8H1Q8NGG4 311 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 OR8J1Q8NGP2 316 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 OR1N2Q8NGR9 330 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 PLPPR1Q8TBJ4 325 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 EME1Q96AY2 570 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 RNFT2Q96EX2 444 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 KCTD7Q96MP8 289 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 HSPB9Q9BQS6 159 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 PLSCR3Q9NRY6 295 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 LYSTQ99698 3801 aa12.19□□□□□ -0.46
PDLIM3-213ENST00000629667 DAPL1A0PJW8 107 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 SULT1B1O43704 296 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 FRMD6-AS1P0C7T7 363 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 GZMHP20718 246 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 IL3RAP26951 378 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF616Q08AN1 781 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 IL13RA2Q14627 380 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 ZNF691Q5VV52 312 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 TMEM65Q6PI78 240 aa12.18□□□□□ -0.46
PDLIM3-213ENST00000629667 ZDHHC13Q8IUH4 622 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms