RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 MRGPRX3Q96LB0 322 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 PGLYRP3Q96LB9 341 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 DNAJC30Q96LL9 226 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 PGLYRP2Q96PD5 576 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RCHY1Q96PM5 261 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RAB6CQ9H0N0 254 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RBKSQ9H477 322 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 BARX1Q9HBU1 254 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 NOX3Q9HBY0 568 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 KIAA1456Q9P272 454 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 PCTPQ9UKL6 214 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 R4GN57 208 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 A0A087WUJ7 227 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 TRAV38-1A0A0B4J264 116 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 GXYLT2A0PJZ3 443 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 MBD3L4A6NDZ8 208 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 MBD3L3A6NE82 208 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 MBD3L5A6NJ08 208 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RNASET2O00584 256 aaKnown RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 TNFSF11O14788 317 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 HLA-AP01891 365 aaKnown RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 PRH1P02810 166 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 TRGC2P03986 189 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RPL35AP18077 110 aaKnown RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 CDKN2AP42771 156 aaKnown RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 CAV3P56539 151 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 EDDM3AQ14507 147 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 ZNF345Q14585 488 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 TMEM255AQ5JRV8 349 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 PRR31Q5SQ13 230 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 ZNF626Q68DY1 528 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 DPPA3Q6W0C5 159 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 Q71RC1 249 aaPredicted RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 STPG4Q8N801 248 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 OR11G2Q8NGC1 345 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 OR51A2Q8NGJ7 313 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 OCC1Q8TAD7 63 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 FAM151AQ8WW52 585 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 PELI1Q96FA3 418 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RARRES2Q99969 163 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 EXOSC3Q9NQT5 275 aaKnown RBP3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 FLRT3Q9NZU0 649 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 OR5V1Q9UGF6 321 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 POLDIP2Q9Y2S7 368 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 RFNGQ9Y644 331 aa3.4□□□□□ -1.86
R3HDM1-220ENST00000628915 OTOFQ9HC10 1997 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 BORCS7-ASMTA0A0B4J1R7 106 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 KIR2DL5BA0A0G2JN68 375 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 KIR2DL5BA0A0G2JPC4 375 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SPAARA0A1B0GVQ0 90 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 IFITM5A6NNB3 132 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 CLDN34H7C241 214 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 NBR2O15453 112 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 OR1I1O60431 355 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SP1P08047 785 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 TRGC1P0CF51 173 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SDC1P18827 310 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC6A9P48067 706 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF83P51522 516 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SRPXP78539 464 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 FABP5Q01469 135 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 HHEXQ03014 270 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A52Q3SY17 297 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 RNASE12Q5GAN4 147 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A30Q5SVS4 291 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 GFI1BQ5VTD9 330 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 KIR2DL5AQ8N109 375 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 PNKDQ8N490 385 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 BMPERQ8N8U9 685 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 MDGA1Q8NFP4 955 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 KIR2DL5BQ8NHK3 375 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 C8orf44Q96CB5 159 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 ZBTB45Q96K62 511 aaPredicted RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 CDX2Q99626 313 aaPredicted RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 LRTM1Q9HBL6 345 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 NOX4Q9NPH5 578 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 AURKAIP1Q9NWT8 199 aaPredicted RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 HRASLS2Q9NWW9 162 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 DNAJC27Q9NZQ0 273 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 FTSJ1Q9UET6 329 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 LSM7Q9UK45 103 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 BOKQ9UMX3 212 aaPredicted RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 B9D1Q9UPM9 204 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 NEUROG3Q9Y4Z2 214 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 DENND4AQ7Z401 1863 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 TRAV36DV7A0A075B6V5 113 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 LILRA5A6NI73 299 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 PRSS46E5RG02 174 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 BCL2L11O43521 198 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF217O75362 1048 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 MT-CO3P00414 261 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 IRF1P10914 325 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 WDR5P61964 334 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 PPP1CAP62136 330 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 TCP10Q12799 353 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 MFAP5Q13361 173 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 FZD2Q14332 565 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM97Q5BJF2 176 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 UBE2NLQ5JXB2 153 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms