RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 B4E171 279 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 RPL36A-HNRNPH2H7BZ11 118 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 TSPAN7P41732 249 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 AESQ08117 197 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 PLPPR5Q32ZL2 321 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 WDR73Q6P4I2 378 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 PRNDQ9UKY0 176 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 C11orf94C9JXX5 98 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 CCL21O00585 134 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 GZMMP51124 257 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 SNRPEP62304 92 aaKnown RBP11.2□□□□□ -0.62
SCN8A-209ENST00000627620 IRF3Q14653 427 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
SCN8A-209ENST00000627620 HARBI1Q96MB7 349 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 PTP4A3O75365 173 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 CXCL3P19876 107 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 ERVS71-1P61550 626 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 BSXQ3C1V8 233 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 TMEM91Q6ZNR0 172 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 LINC00596Q86U02 117 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 OR2J1Q9GZK6 312 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 TRPM6Q9BX84 2022 aa11.2□□□□□ -0.62
SCN8A-209ENST00000627620 CDRT15L2A8MXV6 281 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 CA11O75493 328 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 SLC22A18ASQ8N1D0 253 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 OR4A4PQ8NGN8 299 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 OR1L1Q8NH94 360 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 ANGPTL6Q8NI99 470 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 MS4A10Q96PG2 267 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 PIPOXQ9P0Z9 390 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 LYZL2Q7Z4W2 148 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 ADAD2Q8NCV1 583 aaKnown RBP11.19□□□□□ -0.62
SCN8A-209ENST00000627620 ST6GAL2Q96JF0 529 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 CLN8Q9UBY8 286 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 A0A0J9YW62 118 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 NKX2-6A6NCS4 301 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 UPK3AO75631 287 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 CCKARP32238 428 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 GTF2H5Q6ZYL4 71 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 ASCL3Q9NQ33 180 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 BMPR1BO00238 502 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 EFNB2P52799 333 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 KLF9Q13886 244 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-209ENST00000627620 SCMH1Q96GD3 660 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 KCNMB2Q9Y691 235 aa11.19□□□□□ -0.62
SCN8A-209ENST00000627620 KNTC1P50748 2209 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 SYNGR1O43759 233 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 APELAP0DMC3 54 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 PMS2P11Q13670 270 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 Q8WTZ3 238 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 SULT1A1P50225 295 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 TMEM97Q5BJF2 176 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 LILRB1Q8NHL6 650 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 Q9N2K0 584 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 KLHDC2Q9Y2U9 406 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 PSG2P11465 335 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 TCL1AP56279 114 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 PNRC1Q12796 327 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 SRD5A3Q9H8P0 318 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 ST6GALNAC2Q9UJ37 374 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 WISP3O95389 354 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 CELA2AP08217 269 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 FAM87AP0C7U9 286 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 EIF4EBP2Q13542 120 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 ZNF488Q96MN9 340 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-209ENST00000627620 SEC11CQ9BY50 192 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 WASHC3Q9Y3C0 194 aa11.18□□□□□ -0.62
SCN8A-209ENST00000627620 IGKV3-7A0A075B6H7 116 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 IGKV1-8A0A0C4DH67 115 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 TTRP02766 147 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 COL10A1Q03692 680 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 ZP4Q12836 540 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 SLC25A10Q9UBX3 287 aaPredicted RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 OPN4Q9UHM6 478 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 SIPA1L3O60292 1781 aaPredicted RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 NUP214P35658 2090 aaPredicted RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 IL11P20809 199 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 CD300CQ08708 224 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 C1orf185Q5T7R7 199 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 C10orf113Q5VZT2 155 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 OR10G8Q8NGN5 311 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 LPAR2Q9HBW0 351 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 A0A1W2PPE3 182 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 J3KRW8 73 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 SEMA7AO75326 666 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 CSN3P07498 182 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 FAM27BQ5VT28 67 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 FAM219AQ8IW50 185 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms