RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 MGMTP16455 207 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 GABRA5P31644 462 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 RBM39Q14498 530 aaKnown RBP13.59□□□□□ -0.23
UBE3D-208ENST00000626828 RSBN1Q5VWQ0 802 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-208ENST00000626828 ABHD12Q8N2K0 398 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 PLPPR1Q8TBJ4 325 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 SELENOIQ9C0D9 397 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 CST11Q9H112 138 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 BANF2Q9H503 90 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 TENM1Q9UKZ4 2725 aa13.59□□□□□ -0.23
UBE3D-208ENST00000626828 IGHV2-26A0A0B4J1V2 119 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 A0A1B0GUS0 222 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 MCRIP1C9JLW8 97 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 GLAP06280 429 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 RANBP1P43487 201 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 PSMD7P51665 324 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 FABP5Q01469 135 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 C17orf58Q2M2W7 97 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 LRRC75BQ2VPJ9 315 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 MINOS1Q5TGZ0 78 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 LHFPL4Q7Z7J7 247 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 SPARTQ8N0X7 666 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 TMEM104Q8NE00 496 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 LINC00574Q9H8X3 128 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 ZNF581Q9P0T4 197 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 VPREB3Q9UKI3 123 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 MINOS1-NBL1R4GNA1 71 aa13.58□□□□□ -0.24
UBE3D-208ENST00000626828 H3BUX3 64 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 NDUFA7O95182 113 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 FUT3P21217 361 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 CFPP27918 469 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 HTR2CP28335 458 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 PRRX1P54821 245 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 PRAMEF5Q5TYX0 476 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 BRICD5Q6PL45 260 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 OR10A7Q8NGE5 316 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 OR13A1Q8NGR1 328 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 OR4F5Q8NH21 305 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 KCNG3Q8TAE7 436 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 ZNF596Q8TC21 504 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 Q96M66 194 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 BEX1Q9HBH7 125 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 C1RLQ9NZP8 487 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 MMP24Q9Y5R2 645 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 PEX16Q9Y5Y5 336 aa13.57□□□□□ -0.24
UBE3D-208ENST00000626828 A0A087X0M5 115 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 A0A1B0GX30 115 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 TMEM30CPA0ZSE6 113 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 VGLL3A8MV65 326 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 TOR1AO14656 332 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 SLC22A1O15245 554 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 MT-ND4P03905 459 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 OMGP23515 440 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 HTR1DP28221 377 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 CD34P28906 385 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 GLP1RP43220 463 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 SSX1Q16384 188 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 SSX2Q16385 188 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 UBE2UQ5VVX9 321 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 RAB12Q6IQ22 244 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 OR6M1Q8NGM8 313 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 MRGPRDQ8TDS7 321 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 FCGR1BQ92637 280 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 CREB3L1Q96BA8 519 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 CALYQ9NYX4 217 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 RCC2Q9P258 522 aaKnown RBP13.56□□□□□ -0.24
UBE3D-208ENST00000626828 DPM3Q9P2X0 92 aa13.56□□□□□ -0.24
UBE3D-208ENST00000626828 AK6Q9Y3D8 172 aaKnown RBP13.56□□□□□ -0.24
UBE3D-208ENST00000626828 TRDV1A0A1B0GX56 115 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 NPIPB11E5RHQ5 1161 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 HAX1O00165 279 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 CCRL2O00421 344 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 CA11O75493 328 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 MPIG6BO95866 241 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 IL1AP01583 271 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 VSIG8P0DPA2 414 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 GALP22466 123 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 NFYBP25208 207 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 CALRP27797 417 aaKnown RBP13.55□□□□□ -0.24
UBE3D-208ENST00000626828 GDNFP39905 211 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 RAG2P55895 527 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 FAM189A2Q15884 450 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 ZNF497Q6ZNH5 498 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 SLC16A12Q6ZSM3 486 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 RFESDQ8TAC1 157 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 NDNFQ8TB73 568 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 TAF15Q92804 592 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBE3D-208ENST00000626828 KIRREL1Q96J84 757 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 ZNF747Q9BV97 191 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 PLGRKTQ9HBL7 147 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 ABCB10Q9NRK6 738 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 NDUFB11Q9NX14 153 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 IDI2-AS1Q9NZ38 188 aa13.55□□□□□ -0.24
UBE3D-208ENST00000626828 LEUTXA8MZ59 168 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 SLC17A2O00624 439 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 ORC5O43913 435 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 BPNT1O95861 308 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 PAX6P26367 422 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms