RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 HRH1P35367 487 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 TFPI2P48307 235 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 EFNA4P52798 201 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 COL10A1Q03692 680 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 ZNF770Q6IQ21 691 aaPredicted RBP9.66□□□□□ -0.86
VPS8-227ENST00000625842 TMEM182Q6ZP80 229 aaPredicted RBP9.66□□□□□ -0.86
VPS8-227ENST00000625842 STRCQ7RTU9 1775 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 SHANK3Q9BYB0 1731 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 PPP5D1E7EU14 171 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 OR2F2O95006 317 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 CTLA4P16410 223 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 HLA-GP17693 338 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 HLA-DRB3P79483 266 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 SIAH3Q8IW03 269 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 TCEAL7Q9BRU2 100 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 Q9N2K0 584 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 IDI2-AS1Q9NZ38 188 aa9.66□□□□□ -0.86
VPS8-227ENST00000625842 RIF1Q5UIP0 2472 aaKnown RBP9.66□□□□□ -0.86
VPS8-227ENST00000625842 IGHV3OR16-12A0A075B7B8 117 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 XRCC3O43542 346 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 NBL1P41271 181 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 CLDN20P56880 219 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 CLEC12BQ2HXU8 276 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 SPSB2Q99619 263 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 CDC42EP3Q9UKI2 254 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 MRPS18CQ9Y3D5 142 aaKnown RBP9.65□□□□□ -0.86
VPS8-227ENST00000625842 TSTD3H0UI37 97 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 PSMB6P28072 239 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 RPL12P30050 165 aaKnown RBP9.65□□□□□ -0.86
VPS8-227ENST00000625842 PPOXP50336 477 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 SLC38A11Q08AI6 406 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 CEACAM21Q3KPI0 293 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 RNF212Q495C1 297 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 ABHD12Q8N2K0 398 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 ZIC4Q8N9L1 334 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 C5orf17Q8NAS9 161 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 C20orf27Q9GZN8 174 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 GPR27Q9NS67 375 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 KCNE3Q9Y6H6 103 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 TRPM6Q9BX84 2022 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 ABCA4P78363 2273 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 A0A1B0GU03 582 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 POM121CA8CG34 1229 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 NPIPB11E5RHQ5 1161 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 EREGO14944 169 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 THBDP07204 575 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 NPPCP23582 126 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 FUNDC1Q8IVP5 155 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 ADGRL4Q9HBW9 690 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 ING1Q9UK53 422 aaPredicted RBP9.65□□□□□ -0.86
VPS8-227ENST00000625842 TTC3P53804 2025 aa9.65□□□□□ -0.86
VPS8-227ENST00000625842 ACACAQ13085 2346 aa9.65□□□□□ -0.87
VPS8-227ENST00000625842 NDUFS8O00217 210 aa9.65□□□□□ -0.87
VPS8-227ENST00000625842 HPRT1P00492 218 aa9.65□□□□□ -0.87
VPS8-227ENST00000625842 P2RX3P56373 397 aa9.65□□□□□ -0.87
VPS8-227ENST00000625842 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.87
VPS8-227ENST00000625842 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.87
VPS8-227ENST00000625842 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.87
VPS8-227ENST00000625842 ZNF703Q9H7S9 590 aaPredicted RBP9.65□□□□□ -0.87
VPS8-227ENST00000625842 HIGD1AQ9Y241 93 aa9.65□□□□□ -0.87
VPS8-227ENST00000625842 IGHV3OR15-7A0A075B7D8 119 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 ZNF727A8MUV8 499 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 ZP3P21754 424 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 CDK5Q00535 292 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 SURF2Q15527 256 aaPredicted RBP9.64□□□□□ -0.87
VPS8-227ENST00000625842 OR8B12Q8NGG6 310 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 NTN4Q9HB63 628 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 MRPL22Q9NWU5 206 aaKnown RBP9.64□□□□□ -0.87
VPS8-227ENST00000625842 CEP250Q9BV73 2442 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 LOC390937A0A1W2PQ73 354 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 CD33P20138 364 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 DCTDP32321 178 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 ACSF3Q4G176 576 aaPredicted RBP9.64□□□□□ -0.87
VPS8-227ENST00000625842 WDR38Q5JTN6 314 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 LCN15Q6UWW0 184 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 OR4P4Q8NGL7 312 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 SNRNP40Q96DI7 357 aaKnown RBP9.64□□□□□ -0.87
VPS8-227ENST00000625842 SRRQ9GZT4 340 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 KCNK7Q9Y2U2 307 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 UFC1Q9Y3C8 167 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 J3QR06 171 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 RGS13O14921 159 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 GLI4P10075 376 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 EIF4EBP2Q13542 120 aaPredicted RBP9.64□□□□□ -0.87
VPS8-227ENST00000625842 CD226Q15762 336 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 ZNF66Q6ZN08 573 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 ZNF738Q8NE65 137 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 OR4B1Q8NGF8 309 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 SIRT7Q9NRC8 400 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 TNRC6CQ9HCJ0 1690 aaKnown RBP9.64□□□□□ -0.87
VPS8-227ENST00000625842 TRAV20A0A0B4J274 112 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 HPXP02790 462 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 GALP22466 123 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 GATA3P23771 443 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 HCCSP53701 268 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 H3F3AP84243 136 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 BHLHA9Q7RTU4 235 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 ZDHHC22Q8N966 263 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 C14orf79Q96F83 325 aa9.64□□□□□ -0.87
VPS8-227ENST00000625842 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms