RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FAM90A13PP0C7W8 464 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 FAM90A14PP0C7W9 464 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 FAM90A24PP0C7X0 464 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 SSPNQ14714 243 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 EIF2S3LQ2VIR3 472 aaKnown RBP9.65□□□□□ -0.86
VARS2-213ENST00000625423 RNF212Q495C1 297 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 TMEM217Q8N7C4 229 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
VARS2-213ENST00000625423 OR5C1Q8NGR4 320 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 SPIN2AQ99865 258 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 SPIN2BQ9BPZ2 258 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 GLRX2Q9NS18 164 aa9.65□□□□□ -0.86
VARS2-213ENST00000625423 LYRM2Q9NU23 88 aaPredicted RBP9.65□□□□□ -0.86
VARS2-213ENST00000625423 TNRC6BQ9UPQ9 1833 aaKnown RBP9.65□□□□□ -0.87
VARS2-213ENST00000625423 A0A1W2PPE2 198 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 A0A1W2PPE3 182 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 PITX3O75364 302 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 TMEM50AO95807 157 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 NGFP01138 241 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 S100A6P06703 90 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 SULT1A1P50225 295 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 RND3P61587 244 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 VAMP2P63027 116 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 CEACAM21Q3KPI0 293 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 NRN1LQ496H8 165 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 C6orf15Q6UXA7 325 aaPredicted RBP9.64□□□□□ -0.87
VARS2-213ENST00000625423 FAM24BQ8N5W8 94 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 TUBA4BQ9H853 241 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 B4E171 279 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 C3orf80F5H4A9 247 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 TRAPPC2LH3BP13 241 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 SYNGR1O43759 233 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 TDGF1P13385 188 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 TSPAN7P41732 249 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 ZXDAP98168 799 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 ODF3L1Q8IXM7 274 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 ZNF561Q8N587 486 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 LFNGQ8NES3 379 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 POM121Q96HA1 1249 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 THOC3Q96J01 351 aaKnown RBP9.64□□□□□ -0.87
VARS2-213ENST00000625423 HES7Q9BYE0 225 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 SLC25A31Q9H0C2 315 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 ZNF552Q9H707 407 aaPredicted RBP9.64□□□□□ -0.87
VARS2-213ENST00000625423 BOKQ9UMX3 212 aaPredicted RBP9.64□□□□□ -0.87
VARS2-213ENST00000625423 LOXL2Q9Y4K0 774 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 IGKV3D-15A0A087WSY6 115 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 AGAP20933 346 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 DYNLT3P51808 116 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 NMSQ5H8A3 153 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 OR1J1Q8NGS3 322 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 ZNF488Q96MN9 340 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 SIGLEC12Q96PQ1 595 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 ATPIF1Q9UII2 106 aa9.64□□□□□ -0.87
VARS2-213ENST00000625423 PUS1Q9Y606 427 aaKnown RBP eCLIP9.64□□□□□ -0.87
VARS2-213ENST00000625423 ZFHX2Q9C0A1 2572 aaPredicted RBP9.64□□□□□ -0.87
VARS2-213ENST00000625423 TUSC2O75896 110 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 ZNF14P17017 642 aaPredicted RBP9.63□□□□□ -0.87
VARS2-213ENST00000625423 RAB5AP20339 215 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 LHX2P50458 406 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 SRSF7Q16629 238 aaKnown RBP eCLIP9.63□□□□□ -0.87
VARS2-213ENST00000625423 FREM1Q5H8C1 2179 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 RBMS3Q6XE24 437 aaKnown RBP9.63□□□□□ -0.87
VARS2-213ENST00000625423 MKXQ8IYA7 352 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 SAXO1Q8IYX7 474 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 PCSK5Q92824 1860 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 TAAR9Q96RI9 348 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 ATP23Q9Y6H3 246 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 KIR2DS1A0A191URI9 304 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 CHST1O43916 411 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 EPHA1P21709 976 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 VDAC1P21796 283 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 UCP1P25874 307 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 KIR2DS4P43632 304 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 RUNX1Q01196 453 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 ID3Q02535 119 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 KIR2DS1Q14954 304 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 RHEBQ15382 184 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 PEAR1Q5VY43 1037 aaPredicted RBP9.63□□□□□ -0.87
VARS2-213ENST00000625423 ADAM5Q6NVV9 412 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 SPSB3Q6PJ21 355 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 C20orf204Q6ZNR8 217 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 SUMF2Q8NBJ7 301 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 OR2M7Q8NG81 312 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 PLPPR1Q8TBJ4 325 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 APOBEC3DQ96AK3 386 aaPredicted RBP9.63□□□□□ -0.87
VARS2-213ENST00000625423 LINC00470Q9BZP3 86 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 IFT22Q9H7X7 185 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 CACNA1GO43497 2377 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 FAM166BA8MTA8 275 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 HS3ST1O14792 307 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 HSPA12AO43301 675 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 NEURL1O76050 574 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 CLDN18P56856 261 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 CTAG1AP78358 180 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 MPV17LQ2QL34 196 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 IL22RA1Q8N6P7 574 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 TMEM105Q8N8V8 129 aa9.63□□□□□ -0.87
VARS2-213ENST00000625423 ZNF703Q9H7S9 590 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms