RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 GPR12P47775 334 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 OR3A1P47881 315 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 KCNJ3P48549 501 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 PHYHD1Q5SRE7 291 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 SARAFQ96BY9 339 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 IGHV3-43A0A0B4J1X8 118 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 OR5B21A6NL26 309 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 H7BYZ3 331 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 ZIC3O60481 467 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 IGHV3-43DP0DP04 118 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 KITLGP21583 273 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 FGF8P55075 233 aaPredicted RBP11.13□□□□□ -0.63
MSH6-215ENST00000622629 RTN4RL2Q86UN3 420 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 HPSE2Q8WWQ2 592 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 OR4F4Q96R69 305 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 CABLES2Q9BTV7 478 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 A0A1W2PR64 198 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 A0A1W2PRV1 198 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 A8MXK9 166 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 DEFB109BQ30KR1 87 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 HES3Q5TGS1 186 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 RSRP1Q9BUV0 290 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 HKR1P10072 659 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 RUNX1Q01196 453 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 SPINK9Q5DT21 86 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 ZNF318Q5VUA4 2279 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 AQP10Q96PS8 301 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 PCNX1Q96RV3 2341 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 SERTAD4Q9NUC0 356 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 TINAGQ9UJW2 476 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 MPC1Q9Y5U8 109 aa11.13□□□□□ -0.63
MSH6-215ENST00000622629 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 THADAQ6YHU6 1953 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 DEDDO75618 318 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 CDS2O95674 445 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 IL2RAP01589 272 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 SPP1P10451 314 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 SELEP16581 610 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 ATP6V0CP27449 155 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 PPP1CBP62140 327 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 C1orf87Q8N0U7 546 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 LILRB1Q8NHL6 650 aaPredicted RBP11.12□□□□□ -0.63
MSH6-215ENST00000622629 MRGPRFQ96AM1 343 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 RAB9BQ9NP90 201 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 DIDO1Q9BTC0 2240 aaKnown RBP11.12□□□□□ -0.63
MSH6-215ENST00000622629 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 PRSS44E7EML9 344 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 RPL36A-HNRNPH2H7BZ11 118 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 CRYAAP02489 173 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 ZNF708P17019 499 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 FHITP49789 147 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 SULT1A2P50226 295 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 FAM3AP98173 230 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 WNT5BQ9H1J7 359 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 CRYM-AS1A6NIL9 109 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 SHISA7A6NL88 538 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 CXorf66Q5JRM2 361 aaPredicted RBP11.12□□□□□ -0.63
MSH6-215ENST00000622629 LDLRAD3Q86YD5 345 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 OR52M1Q8NGK5 317 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 MRGPRDQ8TDS7 321 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 TVP23CQ96ET8 276 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
MSH6-215ENST00000622629 TMEM30CPA0ZSE6 113 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 RBFOX3A6NFN3 312 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 OR8U8P0C7N1 319 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 CDCP2Q5VXM1 449 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 TMEM251Q8N6I4 163 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 AKAP6Q13023 2319 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 A0A1W2PPE2 198 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 SYNGR1O43759 233 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 MPV17LQ2QL34 196 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 ETFRF1Q6IPR1 90 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 FAM166AQ6J272 317 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 MRPL14Q6P1L8 145 aaKnown RBP11.11□□□□□ -0.63
MSH6-215ENST00000622629 POC1AQ8NBT0 407 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 OR5A2Q8NGI9 324 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 ADAMTS17Q8TE56 1095 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 TTTY12Q9BZ98 90 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 OSGIN2Q9Y236 505 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 PKDREJQ9NTG1 2253 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 ZFHX2Q9C0A1 2572 aaPredicted RBP11.11□□□□□ -0.63
MSH6-215ENST00000622629 LOC390937A0A1W2PQ73 354 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 SOX15O60248 233 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 NDUFB7P17568 137 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 ZADH2Q8N4Q0 377 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 OR2Z1Q8NG97 314 aa11.11□□□□□ -0.63
MSH6-215ENST00000622629 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
MSH6-215ENST00000622629 OR2D2Q9H210 308 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms