RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 POMPQ9Y244 141 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 ZBED9Q6R2W3 1325 aa2.56□□□□□ -2
CPNE3-213ENST00000622183 SETD1AO15047 1707 aaKnown RBP2.56□□□□□ -2
CPNE3-213ENST00000622183 IGHV1-45A0A0A0MS14 117 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 OR5K4A6NMS3 321 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 TMEM250H0YL14 139 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 ATRNO75882 1429 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 EPPINO95925 133 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 HLA-AP01891 365 aaKnown RBP2.55□□□□□ -2
CPNE3-213ENST00000622183 AKR1C4P17516 323 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 RGS19P49795 217 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 PSMD7P51665 324 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 RHOAP61586 193 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 PDPK2PQ6A1A2 396 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 BRWD3Q6RI45 1802 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 CRLF3Q8IUI8 442 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 C3orf22Q8N5N4 141 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 DYNC2LI1Q8TCX1 351 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 CLDN23Q96B33 292 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 EBPLQ9BY08 206 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 NDEL1Q9GZM8 345 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 ASCL3Q9NQ33 180 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 ZNF586Q9NXT0 402 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 BAZ1BQ9UIG0 1483 aaKnown RBP2.55□□□□□ -2
CPNE3-213ENST00000622183 ATPIF1Q9UII2 106 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 C15orf41Q9Y2V0 281 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 TBL2Q9Y4P3 447 aaKnown RBP2.55□□□□□ -2
CPNE3-213ENST00000622183 ICOSQ9Y6W8 199 aa2.55□□□□□ -2
CPNE3-213ENST00000622183 GPR179Q6PRD1 2367 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 COL4A4P53420 1690 aaPredicted RBP2.54□□□□□ -2
CPNE3-213ENST00000622183 TMEM213A2RRL7 107 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 ZNF729A6NN14 1252 aaPredicted RBP2.54□□□□□ -2
CPNE3-213ENST00000622183 C8orf87E5RJ46 101 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 SMLR1H3BR10 107 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 SYNGR1O43759 233 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 UGT2B11O75310 529 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 NIPSNAP2O75323 286 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 POP7O75817 140 aaKnown RBP2.54□□□□□ -2
CPNE3-213ENST00000622183 TRGV3P03979 118 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 CGB3P0DN86 165 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 CGB7P0DN87 165 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 CD34P28906 385 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 TGFBR2P37173 567 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 KLF3P57682 345 aaPredicted RBP2.54□□□□□ -2
CPNE3-213ENST00000622183 RAB8AP61006 207 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 GNA13Q14344 377 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 ZNF235Q14590 738 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 ELP2Q6IA86 826 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 OLIG3Q7RTU3 272 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 FAM9CQ8IZT9 166 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 LINC00304Q8N9R0 145 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 DNAAF3Q8N9W5 541 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 OR7G1Q8NGA0 311 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 OR5AK3PQ8NH89 298 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 DTD1Q8TEA8 209 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 PRSS27Q9BQR3 290 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 OR51E2Q9H255 320 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 FBXL15Q9H469 300 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 LRRC19Q9H756 370 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 C1orf109Q9NX04 203 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 COMMD9Q9P000 198 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 FBXL3Q9UKT7 428 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 BTRCQ9Y297 605 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 TIMM22Q9Y584 194 aa2.54□□□□□ -2
CPNE3-213ENST00000622183 A8MWP4 228 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 C9J4A7 227 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 C15orf65H3BRN8 121 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 J3QLI3 93 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 PHYHO14832 338 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 MPZL2O60487 215 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 RAB36O95755 333 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 IGKV1D-33P01593 117 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 IGKV1-33P01594 117 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 IGHV3-53P01767 116 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 RD3LP0DJH9 198 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 ATF1P18846 271 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 STC1P52823 247 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 PDZD11Q5EBL8 140 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 TIMM23BQ5SRD1 257 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 ZNF660Q6AZW8 331 aaPredicted RBP2.53□□□□□ -2
CPNE3-213ENST00000622183 LAIR2Q6ISS4 152 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 PAGE2Q7Z2X7 111 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 CALHM3Q86XJ0 350 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 BOD1L2Q8IYS8 172 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 MUC15Q8N387 334 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 ZNF565Q8N9K5 539 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 CCDC12Q8WUD4 166 aaPredicted RBP2.53□□□□□ -2
CPNE3-213ENST00000622183 MAL2Q969L2 176 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 PPP1R14BQ96C90 147 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 TMEM56Q96MV1 263 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 CGREF1Q99674 301 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 ZNF251Q9BRH9 671 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 GABARAPL1Q9H0R8 117 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 METTL17Q9H7H0 456 aaPredicted RBP2.53□□□□□ -2
CPNE3-213ENST00000622183 ATP6V1DQ9Y5K8 247 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 R4GN34 69 aa2.53□□□□□ -2
CPNE3-213ENST00000622183 RAB3GAP2Q9H2M9 1393 aa2.52□□□□□ -2.01
CPNE3-213ENST00000622183 EFCAB9A8MZ26 197 aa2.52□□□□□ -2.01
CPNE3-213ENST00000622183 C4orf51C9J302 202 aa2.52□□□□□ -2.01
CPNE3-213ENST00000622183 GPR171O14626 319 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms